Tc04v2_t004950.1

Overview
NameTc04v2_t004950.1
Unique NameTc04v2_t004950.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length645
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 9 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
Productglutathione S-transferase F11
NoteGlutathione S-transferase F11
Cross References
External references for this mRNA
DatabaseAccession
GeneID18601254
GenbankXM_007032135.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g004950Tc04v2_g004950Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p004950.1Tc04v2_p004950.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto208929auto208929Theobroma cacaoexon
exon-auto208930auto208930Theobroma cacaoexon
exon-auto208931auto208931Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto208932auto208932Theobroma cacaoCDS
CDS-auto208933auto208933Theobroma cacaoCDS
CDS-auto208934auto208934Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t004950.1 ID=Tc04v2_t004950.1|Name=Tc04v2_t004950.1|organism=Theobroma cacao|type=mRNA|length=645bp
ATGGTAGTCAAAGTTCATGGTTCGGTGAGGGCAGCTTGCCCTCAGAGGGT
TTTGGCCTGCCTTCTCGAGAAGGATGTTGAATTCGAGATTTTCCACGTCG
ATCTTGACGCGGGAGAGCATAAGAGACCAGAATTCCTCCTCCGACAGCCG
TTCGGACAAATACCAGCTGTAGAGGATGGCGACTTGAAGCTTTTTGAATC
GAGGGCAATCATAAGATACTATGCTGCCAAGTATGTAGACCGTGGTCCAA
ACCTGCTGGGAAACTCCTTGGAAGAAAGAGCAGTCGTCGATCAGTGGCTT
GAAGTCGAAGCACACAACTTCAATGACTTGGTGAAAACTCTCGTATTTCA
AATTGTCATCCTGCCACGAATGGGAGAGCATGGTGACTTGGCCTTGGCGC
AGAAATGTGAGCAACAGCTGGAGAAAGTCTTCGACATCTACGAGCAGCAC
TTGTCGAAGAGCAGCTATCTCGCTGGAGATTCATTCACCTTGGCTGATCT
TAGCCACCTACCAGCCATTAGATACTTGGTAAACGATGCTGGAATGGGGC
ATTTGGTGTCGGAAAGGAAGCATGTGAATGCGTGGTGGGAGGACATCTCT
AACCGATCTGCATGGAAGAAGCTAATGGAGCTCTCTAAGTACTAG
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protein sequence of Tc04v2_p004950.1

>Tc04v2_p004950.1 ID=Tc04v2_p004950.1|Name=Tc04v2_p004950.1|organism=Theobroma cacao|type=polypeptide|length=215bp
MVVKVHGSVRAACPQRVLACLLEKDVEFEIFHVDLDAGEHKRPEFLLRQP
FGQIPAVEDGDLKLFESRAIIRYYAAKYVDRGPNLLGNSLEERAVVDQWL
EVEAHNFNDLVKTLVFQIVILPRMGEHGDLALAQKCEQQLEKVFDIYEQH
LSKSSYLAGDSFTLADLSHLPAIRYLVNDAGMGHLVSERKHVNAWWEDIS
NRSAWKKLMELSKY*
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