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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns |
Product | lysine--tRNA ligase, chloroplastic/mitochondrial, transcript variant X3 |
Note | Lysine--tRNA ligase, chloroplastic/mitochondrial |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t004800.1 ID=Tc04v2_t004800.1|Name=Tc04v2_t004800.1|organism=Theobroma cacao|type=mRNA|length=1914bp ATGGAGGGCTTGAGGGTGTGGAGGCTAAGCTCATCAATTGCAAGGCCGTT AAGTTTAAGGCAACCACTTGGATTGGGTTATTCTTCCTGTGAACTAGTCC TTTGCTCGAATAGCGGCGTTGTCACCGCCACCAACACCAGGCTGCCCTCT CGCGATAGTCGGTCTTTTACATTCACTTCAACCTCCACTTCGAATCTTGA AGTTGCTTGTGCCATCCGCCTGAAAAAGGTGGAACCATTGTGGAGCAAAG GGTCGCAACCTTATGCTTATAAGTGGGATAGAAGTTATAGATTGGGCTCT TCTTCCTCTGATCTAGTCCCTTGCTGCTCAGATGGCGGCGCTGCCGCTAC CAACACCAAGCTGCACTCTCGCAATCGTGGGTCTTCGACTTCGACTTCCA CTTCAGACCGTGAAGCCGTACGTGCTATCCGTTTGAAAAAGGTGGAACAA TTGCGGAGCAAAGGGTTGGAGCCGTATGCGTATAAGTGGGATAGAAGTCA CAGTGCTAGGGAGTTGCAAGAAATATATAAGAATCTAAATAACGGTGAAG AGTTAGATAGTGAGAGTCATCATGTCTCTATTGCAGGCAGAATTGTTGCT CGCAGAGCCTTTGGAAAGCTTGCTTTTCTCACTTTAAGAGATCACTCCAG CAGTATTCAGCTTTACTGTGAGAAGGAAAGGCTTTTGAATAATCAGTTTG AGCAGTTAAAGACACTTGTTGATATTGGTGATATATTAGGTGCATCTGGC TCTATCAAGCGGACTGAGAAAGGGGAGCTTTCTGTTAAGGTGGATTCTTT TGCAATTCTTACAAAATCTCTGCTTCCGTTGCCTGACAAGTATCATGGTC TAACTGACATTGATAAGCGTTATCGTCAAAGGTATGTTGATATGATTGCA AATCCTGAAGTAGCTGATTTATTCCGGAAACGAGCAAAGATTGTGACGGA GATACGAAAGACGGTGGAATCTCAGGGTTTTGTTGAAGTTGAAACTCCAG TTCTGCAGGGAGCAGCTGGCGGGGCTGAAGCAAGACCATTCATGACATAC CATAACTCCCTTGGAAGGAACCTTTATCTAAGAATTGCAACTGAACTTCA CTTGAAGAGAATGCTGGTTGGAGGATTTGAAAAAGTATATGAGATTGGTC GTATATTCAGAAATGAAGGCATTTCAACTCGTCATAATCCAGAATTTACG ACCATAGAGATGTATGAGGCATATTCAGACTACGAATCTATGATGGACAT GGCTGAGGAAATTGTTACCCGATGTGCTCTTGCAGTTCATGGAGAGCTCA CCATTGATTACCAGGGGGTTGAGATACATTTGGAGAGGCCATGGAGGCGG GAAACCATGCACAATCTTGTTAAAGAAGCCACTGGGATTGATTTCACTGA ATTTGAAAATGATCTTAAAGTTGCTAAAGATGTTGTTATGAAGGCACTGG GAGTTGGGCTTGATAGTAAGGACAAGTTTTCCATTGAAGCCTGCCCTTCA CTTGGCCACCTTCTTAATGAGGTTTTCGAAATTTTTGTTGAACCAAAGCT CCTGCAACCTACATTTGTTTTGGACTATCCCATGGAAATATCTCCTCTTG CCAAACCACACCGGAGGCATGCAGGTTTGACTGAGAGATTTGAACTCTTC ATATGTGGTCGTGAACTGGCTAATGCATTCTCTGAGTTAACTGATCCTTT GGACCAGAGAGCCCGCCTGGAAGAGCAAGTAAGGCAACATAACAAGAAGA GAGCAGAAGCTGTTTCAGTCACAGATAGTATGGAAGAAAAAGATCATAAA AATGAAGACTCTATGTATGAAGTGACTCTTGATGATGATTTTCTTACTGC TTTGGAATATGGAATGCCCCCGGCTTCAGGAATGGCTGTTCCTAACGATT TTGTTGAGGTCTGA back to topprotein sequence of Tc04v2_p004800.1 >Tc04v2_p004800.1 ID=Tc04v2_p004800.1|Name=Tc04v2_p004800.1|organism=Theobroma cacao|type=polypeptide|length=638bp
MEGLRVWRLSSSIARPLSLRQPLGLGYSSCELVLCSNSGVVTATNTRLPS RDSRSFTFTSTSTSNLEVACAIRLKKVEPLWSKGSQPYAYKWDRSYRLGS SSSDLVPCCSDGGAAATNTKLHSRNRGSSTSTSTSDREAVRAIRLKKVEQ LRSKGLEPYAYKWDRSHSARELQEIYKNLNNGEELDSESHHVSIAGRIVA RRAFGKLAFLTLRDHSSSIQLYCEKERLLNNQFEQLKTLVDIGDILGASG SIKRTEKGELSVKVDSFAILTKSLLPLPDKYHGLTDIDKRYRQRYVDMIA NPEVADLFRKRAKIVTEIRKTVESQGFVEVETPVLQGAAGGAEARPFMTY HNSLGRNLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFT TIEMYEAYSDYESMMDMAEEIVTRCALAVHGELTIDYQGVEIHLERPWRR ETMHNLVKEATGIDFTEFENDLKVAKDVVMKALGVGLDSKDKFSIEACPS LGHLLNEVFEIFVEPKLLQPTFVLDYPMEISPLAKPHRRHAGLTERFELF ICGRELANAFSELTDPLDQRARLEEQVRQHNKKRAEAVSVTDSMEEKDHK NEDSMYEVTLDDDFLTALEYGMPPASGMAVPNDFVEV* back to top
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