Tc04v2_t003210.1

Overview
NameTc04v2_t003210.1
Unique NameTc04v2_t003210.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length975
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
Productperoxidase 55
NotePeroxidase 55
Cross References
External references for this mRNA
DatabaseAccession
GeneID18601033
GenbankXM_007031838.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g003210Tc04v2_g003210Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p003210.1Tc04v2_p003210.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto205396auto205396Theobroma cacaoexon
exon-auto205397auto205397Theobroma cacaoexon
exon-auto205398auto205398Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto205399auto205399Theobroma cacaoCDS
CDS-auto205400auto205400Theobroma cacaoCDS
CDS-auto205401auto205401Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t003210.1 ID=Tc04v2_t003210.1|Name=Tc04v2_t003210.1|organism=Theobroma cacao|type=mRNA|length=975bp
ATGGAGGCAATAAGGAGAGGGTTGGTATGGTTACTGGTTTTCATGATTCT
GCAGAGGGGAGAGGCGCAATTATCTGAAAATTTCTACAGCAATACGTGTC
CGAATTTGGAATCCATAGTGAAACAGGAAGTGTCAACCAAGTTCAGCCAG
ACCTTCGTTACAATCCCTGCAACTCTGCGCCTGTTTTTCCATGACTGCTT
TGTTGAGGGATGTGACGCATCAGTCATGATTTCATCGCCAAATGGGGATG
CGGAAAAGGATGCTCAGGATAATCTCTCCCTTGCAGGAGATGGATTTGAC
ACTGTAATCAAGGCGAAGCAGGCAGTGGAAAGACAATGCCCTGGAATAGT
CTCTTGTGCTGACATTTTGGCTCTTGCTGCTAGAGATGTTGTAGTCCTGG
CTGGAGGTCCATCATGGGAAGTAGAATTGGGACGTCGAGATGGCCTCGTA
TCGAAAGCATCCAACGTAGCAGGAAATCTACCTGAGCCTGACTTCAACCG
TGTTCAACTTAACACCATGTTTGCCAGACACAACCTTACCCAACTTGATA
TGATTGCACTCTCAGGAGCTCACACTGTAGGCTTCTCTCACTGCAACCGC
TTTGCAAATCGGTTATACTCATTCTCTTCATCTTCTCCTGTGGATCCTAC
TCTGGACCCTAACTACGCACAAGAGCTGATGCAAGCCTGCCCTCGAAACG
TAGACCCCAGCATTGCCATCAACATGGATCCTGAAACCCCACAAACTTTT
GACAATGTGTACTACCAGAATCTAGTTGCTGGGAAAGGCTTGTTCACTTC
GGATGAGGTGCTTTTCACTGATCCTGCATCTGAGCCTACTGTAAATGATT
TCGCTACCAACCCTGGTAACTTTAATGGAGCCTTTATCACAGCAATGAGG
AAGCTTGGAAGGGTGGGAGTTAAGACTGGTAAAAATGGAGAGATAAGAAT
AGACTGCACTGCCTTTAATTCATGA
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protein sequence of Tc04v2_p003210.1

>Tc04v2_p003210.1 ID=Tc04v2_p003210.1|Name=Tc04v2_p003210.1|organism=Theobroma cacao|type=polypeptide|length=325bp
MEAIRRGLVWLLVFMILQRGEAQLSENFYSNTCPNLESIVKQEVSTKFSQ
TFVTIPATLRLFFHDCFVEGCDASVMISSPNGDAEKDAQDNLSLAGDGFD
TVIKAKQAVERQCPGIVSCADILALAARDVVVLAGGPSWEVELGRRDGLV
SKASNVAGNLPEPDFNRVQLNTMFARHNLTQLDMIALSGAHTVGFSHCNR
FANRLYSFSSSSPVDPTLDPNYAQELMQACPRNVDPSIAINMDPETPQTF
DNVYYQNLVAGKGLFTSDEVLFTDPASEPTVNDFATNPGNFNGAFITAMR
KLGRVGVKTGKNGEIRIDCTAFNS*
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