Tc04v2_t002430.1

Overview
NameTc04v2_t002430.1
Unique NameTc04v2_t002430.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1545
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 35 ESTs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productglucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform
NoteGlucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform
Cross References
External references for this mRNA
DatabaseAccession
GeneID18600930
GenbankXM_018119988.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g002430Tc04v2_g002430Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p002430.1Tc04v2_p002430.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto203856auto203856Theobroma cacaoexon
exon-auto203857auto203857Theobroma cacaoexon
exon-auto203858auto203858Theobroma cacaoexon
exon-auto203859auto203859Theobroma cacaoexon
exon-auto203860auto203860Theobroma cacaoexon
exon-auto203861auto203861Theobroma cacaoexon
exon-auto203862auto203862Theobroma cacaoexon
exon-auto203863auto203863Theobroma cacaoexon
exon-auto203864auto203864Theobroma cacaoexon
exon-auto203865auto203865Theobroma cacaoexon
exon-auto203866auto203866Theobroma cacaoexon
exon-auto203867auto203867Theobroma cacaoexon
exon-auto203868auto203868Theobroma cacaoexon
exon-auto203869auto203869Theobroma cacaoexon
exon-auto203870auto203870Theobroma cacaoexon
exon-auto203871auto203871Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto203872auto203872Theobroma cacaoCDS
CDS-auto203873auto203873Theobroma cacaoCDS
CDS-auto203874auto203874Theobroma cacaoCDS
CDS-auto203875auto203875Theobroma cacaoCDS
CDS-auto203876auto203876Theobroma cacaoCDS
CDS-auto203877auto203877Theobroma cacaoCDS
CDS-auto203878auto203878Theobroma cacaoCDS
CDS-auto203879auto203879Theobroma cacaoCDS
CDS-auto203880auto203880Theobroma cacaoCDS
CDS-auto203881auto203881Theobroma cacaoCDS
CDS-auto203882auto203882Theobroma cacaoCDS
CDS-auto203883auto203883Theobroma cacaoCDS
CDS-auto203884auto203884Theobroma cacaoCDS
CDS-auto203885auto203885Theobroma cacaoCDS
CDS-auto203886auto203886Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t002430.1 ID=Tc04v2_t002430.1|Name=Tc04v2_t002430.1|organism=Theobroma cacao|type=mRNA|length=1545bp
ATGGGATCAGGTGAATGGTGCCTTCAGAAAAGAGATAGCTTTAAGAGTGA
TTCATTTTCAATCAATGAGAATGTGCTGGAAACTGGGTGCCTCTCAATTA
TCGTTCTTGGTGCCTCTGGTGATCTTGCGAAGAAGAAGACTTTCCCTGCT
CTCTTTCATCTTTATTGCCAGGGATTTCTACCACCAGATGAGGTGCACAT
TTTTGGCTATGCAAGGACTAAGATTTCAGATGATGAATTGAGAAATCGCA
TTCGTGGATATCTTGTCAGTGACAGAAGTGCTTCACCCTCAGAAGATGTT
TCAAAGTTCTTACAGCTGATTAAATATGTAAGCGGGTCATATGATGCTGC
TGAGGGCTTTCAACTGTTAGACAGGGCAATTGCAGCGCATGAATTCTCGA
AAAGTAGCCAAGAAGGGTCATCACGGAGACTGTTTTATCTTGCACTTCCA
CCATCAGTATATCCATCTGTTTGCAGGATGATCAGGCAATATTGCATGAA
TAAATCTGATCTTGGTGGATGGACTCGGATTGTTGTTGAGAAGCCCTTTG
GCAAAGATTTGGACTCTGCAGAGCAACTGAGTGCCCAGATTGGGGAGTTG
TTTGAGGAACCACAAATTTACCGTATTGATCACTATTTAGGAAAGGAATT
AGTCCAGAACTTGTTGGTACTTCGTTTTGCTAATCGCTTGTTCTTGCCCC
TTTGGAATCGTGACAACATTGATAATGTACAGATTGTATTCAGAGAGGAT
TTTGGAACTGAAGGTCGTGGTGGATATTTTGATGAATACGGAATTATCCG
CGATATTATCCAAAACCACCTGTTGCAGGTTCTTTGTCTTGTTGCTATGG
AGAAGCCTGTTTCTCTCAAACCTGAGCACATTCGTGATGAGAAAGTGAAG
GTTCTTCAATCAGTACTTCCAATTAAAGATGAAGAGGTTGTACTTGGACA
ATATGAAGGTTACACAGATGATCCAACAGTTCCTGACCACTCCAACACTC
CAACATTTGCAACTGTTATTCTCCGTATACATAATGAAAGATGGGAAGGT
GTTCCATTTATACTAAAGGCAGGGAAAGCATTGAATTCAAGAAAGGCAGA
GATACGTGTTCAATTTAAGGATGTTCCTGGTGATATTTTCAAATGTAAAA
AGCAAGGGAGAAATGAATTTGTGATACGCCTGCAACCTTCTGAAGCCATG
TACATGAAGCTAACAGTGAAGCAGCCTGGTCTGGAGATGTTAACAGTGCA
AAGTGAACTAGATTTGTCATACAGGCAACGTTATCAAAATGTTACAATTC
CTGAGGCTTATGAACGTCTTATTCTTGACACGATAAGGGGTGATCAGCAG
CATTTTGTTCGCAGAGATGAATTGAAGGCGGCATGGGAGATTTTCACGCC
TCTTCTACACGGAATTGACAATGGTGAACTGAAGCCAACTCTATACCAAC
CAGGCAGCCGTGGTCCTGCAGAAGCAGATGAGCTTTCAGCTAAAGCTGGT
TATGTTCAAACACATGGATATATATGGATTCCTCCCACCTTGTAG
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protein sequence of Tc04v2_p002430.1

>Tc04v2_p002430.1 ID=Tc04v2_p002430.1|Name=Tc04v2_p002430.1|organism=Theobroma cacao|type=polypeptide|length=515bp
MGSGEWCLQKRDSFKSDSFSINENVLETGCLSIIVLGASGDLAKKKTFPA
LFHLYCQGFLPPDEVHIFGYARTKISDDELRNRIRGYLVSDRSASPSEDV
SKFLQLIKYVSGSYDAAEGFQLLDRAIAAHEFSKSSQEGSSRRLFYLALP
PSVYPSVCRMIRQYCMNKSDLGGWTRIVVEKPFGKDLDSAEQLSAQIGEL
FEEPQIYRIDHYLGKELVQNLLVLRFANRLFLPLWNRDNIDNVQIVFRED
FGTEGRGGYFDEYGIIRDIIQNHLLQVLCLVAMEKPVSLKPEHIRDEKVK
VLQSVLPIKDEEVVLGQYEGYTDDPTVPDHSNTPTFATVILRIHNERWEG
VPFILKAGKALNSRKAEIRVQFKDVPGDIFKCKKQGRNEFVIRLQPSEAM
YMKLTVKQPGLEMLTVQSELDLSYRQRYQNVTIPEAYERLILDTIRGDQQ
HFVRRDELKAAWEIFTPLLHGIDNGELKPTLYQPGSRGPAEADELSAKAG
YVQTHGYIWIPPTL*
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