Tc04v2_t000080.3

Overview
NameTc04v2_t000080.3
Unique NameTc04v2_t000080.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length489
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Productprobable gluconokinase, transcript variant X5
NoteGluconokinase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18600678
GenbankXM_018118615.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g000080Tc04v2_g000080Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p000080.3Tc04v2_p000080.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto199006auto199006Theobroma cacaoexon
exon-auto199007auto199007Theobroma cacaoexon
exon-auto199008auto199008Theobroma cacaoexon
exon-auto199009auto199009Theobroma cacaoexon
exon-auto199010auto199010Theobroma cacaoexon
exon-auto199011auto199011Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto199012auto199012Theobroma cacaoCDS
CDS-auto199013auto199013Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t000080.3 ID=Tc04v2_t000080.3|Name=Tc04v2_t000080.3|organism=Theobroma cacao|type=mRNA|length=489bp
ATGTTGGCCAAAGTTTTGAACTGTGGCTTTCTTGATGCTGATGATTTCCA
TCCACTATCAAATAAAGAAAAGATGTGCCAAGGTGTTCCCCTCTCAGAGG
AGGATCGGATTCCGTGGCTGGAAATGCTAAGGGATGTTCTAAAAGAGAAC
TTAGTAGTTGGAAAAACTGTGGTACTTGGGTGTTCTTCTCTGCAGAAACA
TTACAGAGAAATTCTAAGATGTGCTGATGCTGCTTATGAACATGGCAGCT
ATGCCAGTAAGGTGCAGTTTGTTCTGTTGGATGCCCGGGCTGAGGTGCTT
GCTGGTCGGCTTGAGAAGAGAGCTGCAGAAGGGAATCATTTCATGCCAGT
CACGCTTCTGCAATCTCAACTAGACTTACTTCACATAGATGATGCTGAAG
GGATATTCAAGGTTGATGCTACTTTAAGCCCTCAAGTCATTGTAAGCACA
ATACAAGCATTGTTGTTGTCTAAACAAGCCATAGATTAA
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protein sequence of Tc04v2_p000080.3

>Tc04v2_p000080.3 ID=Tc04v2_p000080.3|Name=Tc04v2_p000080.3|organism=Theobroma cacao|type=polypeptide|length=163bp
MLAKVLNCGFLDADDFHPLSNKEKMCQGVPLSEEDRIPWLEMLRDVLKEN
LVVGKTVVLGCSSLQKHYREILRCADAAYEHGSYASKVQFVLLDARAEVL
AGRLEKRAAEGNHFMPVTLLQSQLDLLHIDDAEGIFKVDATLSPQVIVST
IQALLLSKQAID*
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