Tc03v2_t024780.1

Overview
NameTc03v2_t024780.1
Unique NameTc03v2_t024780.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length582
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 10 ESTs, 56 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productabscisic acid receptor PYL8
NoteAbscisic acid receptor PYL8
Cross References
External references for this mRNA
DatabaseAccession
GeneID18606688
GenbankXM_007040435.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g024780Tc03v2_g024780Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p024780.1Tc03v2_p024780.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto192832auto192832Theobroma cacaoexon
exon-auto192833auto192833Theobroma cacaoexon
exon-auto192834auto192834Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto192835auto192835Theobroma cacaoCDS
CDS-auto192836auto192836Theobroma cacaoCDS
CDS-auto192837auto192837Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t024780.1 ID=Tc03v2_t024780.1|Name=Tc03v2_t024780.1|organism=Theobroma cacao|type=mRNA|length=582bp
ATGGTGACCAATGATTATATCACCATGAACGGGAACGGTTTTAGTAAGAT
GGAAGAAGAGTTCATCAAGAGGCACCACCAACACGACGTTAAAGAAAATC
AGTGTACCTCTTCGCTCGTTAAACACATCAAAGCTCCCATTCATCTCGTT
TGGTCTTTGGTGAGGAGATTCGATCAACCGCAGAAGTACAAACCATTTGT
TAGCAGGTGTGTTGTGCAGGGTGACCTTCAGATTGGAAGCGTTAGAGAAG
TCAATGTTAAGTCAGGACTGCCAGCCACAACTAGCACTGAAAGGTTGGAG
TATCTAGATGATGATGAGCATATTTTGAGCATGAAGATTGTTGGCGGAGA
TCACAGGTTGAAGAACTACTCATCCATTGTTACAGTCCATCCTGAGGTCA
TTGATGGCAGGCCAGGAACTTTGGTGATTGAGTCATTTGTGGTGGATGTA
CCAGATGGGAACACCAAGGACGAAACATGCTACTTTGTTGAGGCACTGAT
CAAGTGCAACCTCAAGTCATTAGCAGATGTTTCAGAGCGTTTGGCTGTTC
AGGATCGAACTGAACCCATTGAGAGGATGTGA
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protein sequence of Tc03v2_p024780.1

>Tc03v2_p024780.1 ID=Tc03v2_p024780.1|Name=Tc03v2_p024780.1|organism=Theobroma cacao|type=polypeptide|length=194bp
MVTNDYITMNGNGFSKMEEEFIKRHHQHDVKENQCTSSLVKHIKAPIHLV
WSLVRRFDQPQKYKPFVSRCVVQGDLQIGSVREVNVKSGLPATTSTERLE
YLDDDEHILSMKIVGGDHRLKNYSSIVTVHPEVIDGRPGTLVIESFVVDV
PDGNTKDETCYFVEALIKCNLKSLADVSERLAVQDRTEPIERM*
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