Tc03v2_t024380.1

Overview
NameTc03v2_t024380.1
Unique NameTc03v2_t024380.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length447
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 56 ESTs, 127 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productubiquitin-conjugating enzyme E2-17 kDa
NoteUbiquitin-conjugating enzyme E2-17 kDa
Cross References
External references for this mRNA
DatabaseAccession
GeneID18606642
GenbankXM_018118215.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g024380Tc03v2_g024380Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p024380.1Tc03v2_p024380.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto192345auto192345Theobroma cacaoexon
exon-auto192346auto192346Theobroma cacaoexon
exon-auto192347auto192347Theobroma cacaoexon
exon-auto192348auto192348Theobroma cacaoexon
exon-auto192349auto192349Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto192350auto192350Theobroma cacaoCDS
CDS-auto192351auto192351Theobroma cacaoCDS
CDS-auto192352auto192352Theobroma cacaoCDS
CDS-auto192353auto192353Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t024380.1 ID=Tc03v2_t024380.1|Name=Tc03v2_t024380.1|organism=Theobroma cacao|type=mRNA|length=447bp
ATGGCTTCAAAGCGGATCTTGAAGGAGCTCAAGGATCTCCAGAAAGATCC
TCCTACCTCTTGCAGCGCAGGCCCTGTTGCTGAAGACATGTTTCATTGGC
AAGCAACAATTATGGGTCCTCCTGACAGTCCATATGCCGGTGGAGTGTTT
CTAGTCACAATTCATTTCCCTCCGGACTATCCATTCAAACCACCCAAGGT
TGCATTCAGGACAAAGGTCTTTCATCCCAATATTAACAGCAACGGTAGCA
TTTGCCTCGATATTTTGAAGGAGCAGTGGAGCCCTGCCCTCACCATATCC
AAGGTGTTGCTCTCAATCTGCTCACTCTTGACGGATCCAAATCCTGATGA
CCCGTTGGTACCGGAGATTGCCCACATGTACAAGACTGACAGGAGCAAGT
ATGAGACAACTGCGCGGAGCTGGACTCAGAAGTATGCTATGGGTTAA
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protein sequence of Tc03v2_p024380.1

>Tc03v2_p024380.1 ID=Tc03v2_p024380.1|Name=Tc03v2_p024380.1|organism=Theobroma cacao|type=polypeptide|length=149bp
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVF
LVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
KVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG*
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