Tc03v2_t023620.1

Overview
NameTc03v2_t023620.1
Unique NameTc03v2_t023620.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1419
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 10 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
Product(-)-alpha-terpineol synthase-like
Note(-)-alpha-terpineol synthase
Cross References
External references for this mRNA
DatabaseAccession
GeneID108661193
GenbankXM_018117143.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g023620Tc03v2_g023620Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p023620.1Tc03v2_p023620.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto191034auto191034Theobroma cacaoexon
exon-auto191035auto191035Theobroma cacaoexon
exon-auto191036auto191036Theobroma cacaoexon
exon-auto191037auto191037Theobroma cacaoexon
exon-auto191038auto191038Theobroma cacaoexon
exon-auto191039auto191039Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto191040auto191040Theobroma cacaoCDS
CDS-auto191041auto191041Theobroma cacaoCDS
CDS-auto191042auto191042Theobroma cacaoCDS
CDS-auto191043auto191043Theobroma cacaoCDS
CDS-auto191044auto191044Theobroma cacaoCDS
CDS-auto191045auto191045Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t023620.1 ID=Tc03v2_t023620.1|Name=Tc03v2_t023620.1|organism=Theobroma cacao|type=mRNA|length=1419bp
ATGATGCTTGACAAAGAGATAAATCTTTTGGAGCAACTTGAGCTAATCGA
TTCCTTGCAAAGACTTGGATTATCTTATCACTTTGAAAATGAAATCAAGA
CAATTTTGGATAGTATAAGTGCTGATCACATCTATGTTGCATGGAAGAAA
GATAACTTACATGCTATAGCAATTGAATTTAGGCTCCTAAGGCAGCACGG
CTATAAAGTAACTCAAGAGGTTTTCTCTAATTTCACGGACGAGATGGGGA
ACTTTAAGGCAAGTCTTTGTGAGGATTGCAAAGGGCTGCTTAACTTGTAT
GAGGCTTCATACCATTTGGTAGAGGGTGAAAGCATGTTGGAGAAGGCAAG
AGATTTCGCAGCTAAACGTCTCAAGGAATATCTGAAGCAGAACAAAGATC
CATACCTTTCCTTACTTGTGGAGCATGCTTTGGAACTTCCGCTACATTGG
AGGATGCCACGGTTCGAAGCCAGGTTTTTCATAGATGTGTATGAGAGACG
AGAGGACAGAAATCTCATTCTTTTGGAGCTTGCTAACTTGGACTTCAATA
TAGTGCAAGCTGTGCACCAGGATGATCTAAAATATGCTTCAAAGTGGTGG
ACCGATTTAGATATACGGAAAAAGCTGACCTTTGCCAGAGCTAGGTTGAT
GGAGAACTTTTTATTCGCTGTTGGCGAAGCATCTGATCCTCAGTTCGGGT
ATTTTAGAAGAACGCAGACAAAGATTAATACATTCATAACGACTATAGAC
GATGTTTATGATGTGTATGGTACATTGGATGAGTTAGAGCTCTTCACTGA
AGCTGTTGAGAGATGGGATACCAATGCAATGCAGCTGCTTCCAGAATATA
TGCAGATATGTTTCCTTGCTCTTTACAATTTCACAAACGAAATAGCTTTT
GACGTCCTTAAGGGTAAAGGATTTAACACCATTCCTTTCCTGAAGAAAGC
GTGGGCAGACTTGTGTAAATCATATTTATTGGAGGCAAAGTGGTATTACA
GTGGATATAAACCCACCCTGCAGGAGTACATTGATAATGCATGGATTTCG
ATTTCGGGTCCTGTGGTACTATCACATGCTTTTGTGTTAACAAATTTAAA
GACAAAGGAATGCTTGGAATCCTTCGAAGAATACTCCAACATAATCTACT
ATTTTTGTCTGATTTGTCGACTTGTTAATGATCTTGAAACATCATCGGAT
GAATTAAAAAGAGGTGATGTTTCTAAATCAATTCAATGTTATATACACGA
AACTGGAACTTCAGAAGAAGAAGCCCGACGACACATACGAAAGTTGATTG
ATGCAACATGGAGAAGGATGAGCGAAGAGCAAATTGCTGACTCTCCTTTT
CCTCGACCATTTATTCAAATTGCTGAGATGTATTTTACATACAGTGACAA
ACTTTATATTTCAAAATAA
back to top

protein sequence of Tc03v2_p023620.1

>Tc03v2_p023620.1 ID=Tc03v2_p023620.1|Name=Tc03v2_p023620.1|organism=Theobroma cacao|type=polypeptide|length=473bp
MMLDKEINLLEQLELIDSLQRLGLSYHFENEIKTILDSISADHIYVAWKK
DNLHAIAIEFRLLRQHGYKVTQEVFSNFTDEMGNFKASLCEDCKGLLNLY
EASYHLVEGESMLEKARDFAAKRLKEYLKQNKDPYLSLLVEHALELPLHW
RMPRFEARFFIDVYERREDRNLILLELANLDFNIVQAVHQDDLKYASKWW
TDLDIRKKLTFARARLMENFLFAVGEASDPQFGYFRRTQTKINTFITTID
DVYDVYGTLDELELFTEAVERWDTNAMQLLPEYMQICFLALYNFTNEIAF
DVLKGKGFNTIPFLKKAWADLCKSYLLEAKWYYSGYKPTLQEYIDNAWIS
ISGPVVLSHAFVLTNLKTKECLESFEEYSNIIYYFCLICRLVNDLETSSD
ELKRGDVSKSIQCYIHETGTSEEEARRHIRKLIDATWRRMSEEQIADSPF
PRPFIQIAEMYFTYSDKLYISK*
back to top