Tc03v2_t022320.1

Overview
NameTc03v2_t022320.1
Unique NameTc03v2_t022320.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1065
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 mRNA, 71 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productleucoanthocyanidin dioxygenase
NoteLeucoanthocyanidin dioxygenase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18606417
GenbankXM_007040006.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g022320Tc03v2_g022320Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p022320.1Tc03v2_p022320.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto188036auto188036Theobroma cacaoexon
exon-auto188037auto188037Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto188038auto188038Theobroma cacaoCDS
CDS-auto188039auto188039Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t022320.1 ID=Tc03v2_t022320.1|Name=Tc03v2_t022320.1|organism=Theobroma cacao|type=mRNA|length=1065bp
ATGGTGACTTCAATGGCCCCCAGAGTAGAGAGCTTGGCAAGCAGTGGGAT
TCAGTCCATCCCGAAGGAGTACATTAGACCTCAGGAAGAGCTTACAAGCA
TCGGTAATGTGTTTGAAGAAGAGAAAAAAGAGGAAGGGCCTCAGGTTCCA
ACCATTGATTTAAAGGAAATTGACTCAGAGGACACAGAGGTACGCGAGAG
ATGTCGCCAGGAGTTGAAGAAAGCTGCCATGGAGTGGGGTGTGATGCACC
TTGTTAACCATGGGATCTCGGACGAGCTCATGGAACGTGTCAAGAAAGCT
GGACAGAAGTTCTTTGAACTTTCTGTCGAGGAGAAAGAGAAGTATGCCAA
CGACCAGGCTTCGGGGAAGATTCAGGGGTATGGCAGCAAGCTAGCTAACA
ATGCTAGTGGTCAGCTTGAGTGGGAGGACTACTTCTTCCATCTTGTGTAT
CCCGAGGACAAGAGAGACTTGTCCATCTGGCCTCAAACACCAAGCGACTA
CACCGAAGTCACAAGTGAGTACGCAAGGCAACTCCGAGTCCTTGCGAGCA
AAATTCTTTCGGCACTATCACTTTGCTTAGGATTGGAAGAAGGAAGGCTA
GAGAAGGAAGTTGGTGGATTGGAAGAGCTCCTTCTTCAAATGAAAATCAA
TTACTATCCCAAATGCCCTCAACCAGAACTCGCTCTCGGTGTGGAAGCTC
ACACAGATGTAAGTGCACTTACCTTCATTCTCCACAACATGGTCCCTGGC
CTGCAACTTTTCTACGAAGGCAAGTGGATCACCGCAAAATGTGTTCCAAA
CTCCATCATCATGCACATTGGTGACACCATCGAGATCCTCAGCAATGGTA
AGTACAAGAGCATTCTTCACAGGGGTCTGGTTAACAAGGAGAAGGTTAGG
ATCTCATGGGCAGTTTTCTGTGAGCCGCCAAAGGAGAAGATCATTCTCAA
GCCACTGCCAGAGACTGTGTCCGAGACGGAGCCTCCGTTGTTCCCTCCTC
GCACCTTTGCTCAGCATATTCACCACAAGCTGTTTAGGAAGACCCAGGAT
GGCCTGTCTAATTGA
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protein sequence of Tc03v2_p022320.1

>Tc03v2_p022320.1 ID=Tc03v2_p022320.1|Name=Tc03v2_p022320.1|organism=Theobroma cacao|type=polypeptide|length=355bp
MVTSMAPRVESLASSGIQSIPKEYIRPQEELTSIGNVFEEEKKEEGPQVP
TIDLKEIDSEDTEVRERCRQELKKAAMEWGVMHLVNHGISDELMERVKKA
GQKFFELSVEEKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHLVY
PEDKRDLSIWPQTPSDYTEVTSEYARQLRVLASKILSALSLCLGLEEGRL
EKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPG
LQLFYEGKWITAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKEKVR
ISWAVFCEPPKEKIILKPLPETVSETEPPLFPPRTFAQHIHHKLFRKTQD
GLSN*
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