Tc03v2_t022300.1

Overview
NameTc03v2_t022300.1
Unique NameTc03v2_t022300.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1014
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productglyoxylate/hydroxypyruvate reductase HPR3
NoteGlyoxylate/hydroxypyruvate reductase HPR3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18606414
GenbankXM_007040002.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g022300Tc03v2_g022300Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p022300.1Tc03v2_p022300.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto188026auto188026Theobroma cacaoexon
exon-auto188027auto188027Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto188028auto188028Theobroma cacaoCDS
CDS-auto188029auto188029Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t022300.1 ID=Tc03v2_t022300.1|Name=Tc03v2_t022300.1|organism=Theobroma cacao|type=mRNA|length=1014bp
ATGGCTACCAAAGAAACTGATAACCAGCAACAACGCTCATCGCAAGAGCT
ACCTGTAGTACTCGTAAATCGTCTACCATCATTCAGGTTGCCTTCCAAGC
CTCCTTTCGAAGACGATCTACTTTCTCACTTCCACCTCCTGGACCCTCAC
GACTCGCCTGAGCCATACGACTCCTTCCTTTCCCGTCATGCTAGCTCCAT
CAGGGCTCTCATCACTGTTGGCACCACGCCGGTTACCGCCGAGTTTCTCA
ATCTTCTGCCTTGTTTGGGGCTTGTTGTGGGAACTAGTGCCGGTCTTGAT
CATATCGACCTCCCAGCTTGTCGGAGTCGAGGCATCGCTGTTACTAATGC
TAGCTCTGCCTTCTCCGAGGATGTAGCAGATTGTGCTGTTGGGTTGTTGA
TTGATGTTCTTAGAAGAATTTCTTCTGCTGATCGATTTGTTCGTGGCCGG
ATGTGGCCTGCTAAGAAAGAGTATCCTCTTGGTTTTAAGTTAAGGGGAAA
GCGAGTTGGGATTGTAGGCCTGGGAAGCATTGGTTCTGAAGTTGCAACGA
GGCTTTCGGCCTTCGACTGCAGCATTGCCTACAGCTCAAGGAAGAAGAAG
CCATCCGTTCCATTTCCATTCTATGCTAATGTTGGCGACCTTGCATCAAA
CAGTGATGTTCTCATACTTTGTTGTGCACTGACAGAGGAAACTACCCACA
TTGTAAATAAGGATGTCATGATAGCACTAGGGAAGCAAGGGGTGATAATC
AATGTTGGGCGTGGTTATCTTATCGACGAGAAGGAATTAGTGCAGTGTTT
GCTGCGAGGAGAAATTGGGGGTGCAGGTCTTGATGTGTTTGAAAATGAGC
CTAATGTGCCCAAGGAGCTATTAGGACTTGATAATGTTGTGTTGTCTCCA
CATCGCGCAGTCATGACCCCCGAATCCTTTGAAGCATTGCTCCAGCTGAC
CGTTGCTAACTTAAAAGCTTTCTTTTCAAACAAACCTTTGTTATCTGTAG
TGTCAAATGAATGA
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protein sequence of Tc03v2_p022300.1

>Tc03v2_p022300.1 ID=Tc03v2_p022300.1|Name=Tc03v2_p022300.1|organism=Theobroma cacao|type=polypeptide|length=338bp
MATKETDNQQQRSSQELPVVLVNRLPSFRLPSKPPFEDDLLSHFHLLDPH
DSPEPYDSFLSRHASSIRALITVGTTPVTAEFLNLLPCLGLVVGTSAGLD
HIDLPACRSRGIAVTNASSAFSEDVADCAVGLLIDVLRRISSADRFVRGR
MWPAKKEYPLGFKLRGKRVGIVGLGSIGSEVATRLSAFDCSIAYSSRKKK
PSVPFPFYANVGDLASNSDVLILCCALTEETTHIVNKDVMIALGKQGVII
NVGRGYLIDEKELVQCLLRGEIGGAGLDVFENEPNVPKELLGLDNVVLSP
HRAVMTPESFEALLQLTVANLKAFFSNKPLLSVVSNE*
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