Tc03v2_t022290.1

Overview
NameTc03v2_t022290.1
Unique NameTc03v2_t022290.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1017
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productglyoxylate/hydroxypyruvate reductase HPR3
NoteGlyoxylate/hydroxypyruvate reductase HPR3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18606413
GenbankXM_018116896.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g022290Tc03v2_g022290Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p022290.1Tc03v2_p022290.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto188019auto188019Theobroma cacaoexon
exon-auto188020auto188020Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto188021auto188021Theobroma cacaoCDS
CDS-auto188022auto188022Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t022290.1 ID=Tc03v2_t022290.1|Name=Tc03v2_t022290.1|organism=Theobroma cacao|type=mRNA|length=1017bp
ATGGGTTATCATCAAAAACCGCAGTACCTCTCCAAGACCCTTGAACAAGA
CCTCCTCCTTCCTCGTGTTCTTGTCCTTCGCTCTCCCTCTGTTCCTTCTT
TCTTCTTCTCCAAATCCCATTTACAAGCTCATTTCCATCTCGTCGACCCG
CTCGACTCGCCAGAGCCAACTCACTCTTTCCTCTCCCGTCACGCTGCCTC
GGTGCTTGCCCTTCTCTGCGTGGCCAGCACGCGCGTCTCCTCGGAAACTC
TTTCCCTTCTTCCTTCTTTGAAGCTCGTCGTGGCCTCCAGTGCTGGACTT
GACCACATCGACTTAGGAGAGTGCCGCCGCCGAGGCATTACCGTCACCAG
TGCTGGTCAAGTCTTCACAGAGGATGTTGCTGACTTCGCTGTCGGGCTTC
TCATCGATGTTCTCCGACGAGTGTCAGCCAGTGATGGGTGTGTTCGGGCC
CGGTTGTGGGCCGAAAAGAGACCATTCCCGCTTGGTGTAAAGCTGGGTGG
AAATCGAGTTGGAATTGTGGGACTTGGAAGAATTGGGTCGGAAGTTGCAA
AAAGGCTGATAGATTTTGGCTGCAGCATTGCCTACTGCTCGAGAAAGGAG
AAGCCATCTGTCCCATACCCTTACTATTCCACTGTAAGTGAACTTGCGAC
AAACAGTGATGTTCTCATTCTTTGCTGCTCTTTGACAAAAGAAACTCACC
ACATAATCAACAAAGGTGTCATGGAAGCATTAGGGAAGGAAGGAGTGATA
ATTAACATTGGAAGGGGGGCTCTGATCGATGAGAAGGAATTGGTGAAGTT
TTTGCAGCAAGGGCAAATTCTTGGTGCGGGTCTTGATGTGTATGAGAATG
AGCCCCATGTGTCGCAAGAGCTGTTTGCAATGGAGAATGTTGTTTTGGCT
CCTCATGCTGCTGTCTACACGCTAGAATCCTTTGCAGCATTGCAGGAGCT
GGTCGTAGGGAACTTGAAGGCTTTCTTCTCCAATAAGCCTTTGCTTACAC
CTGCTCAACTTGAATGA
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protein sequence of Tc03v2_p022290.1

>Tc03v2_p022290.1 ID=Tc03v2_p022290.1|Name=Tc03v2_p022290.1|organism=Theobroma cacao|type=polypeptide|length=339bp
MGYHQKPQYLSKTLEQDLLLPRVLVLRSPSVPSFFFSKSHLQAHFHLVDP
LDSPEPTHSFLSRHAASVLALLCVASTRVSSETLSLLPSLKLVVASSAGL
DHIDLGECRRRGITVTSAGQVFTEDVADFAVGLLIDVLRRVSASDGCVRA
RLWAEKRPFPLGVKLGGNRVGIVGLGRIGSEVAKRLIDFGCSIAYCSRKE
KPSVPYPYYSTVSELATNSDVLILCCSLTKETHHIINKGVMEALGKEGVI
INIGRGALIDEKELVKFLQQGQILGAGLDVYENEPHVSQELFAMENVVLA
PHAAVYTLESFAALQELVVGNLKAFFSNKPLLTPAQLE*
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