Tc03v2_t022190.1

Overview
NameTc03v2_t022190.1
Unique NameTc03v2_t022190.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length942
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productnudix hydrolase 14, chloroplastic
NoteNudix hydrolase 14, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18606404
GenbankXM_007039990.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g022190Tc03v2_g022190Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p022190.1Tc03v2_p022190.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto187794auto187794Theobroma cacaoexon
exon-auto187795auto187795Theobroma cacaoexon
exon-auto187796auto187796Theobroma cacaoexon
exon-auto187797auto187797Theobroma cacaoexon
exon-auto187798auto187798Theobroma cacaoexon
exon-auto187799auto187799Theobroma cacaoexon
exon-auto187800auto187800Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto187801auto187801Theobroma cacaoCDS
CDS-auto187802auto187802Theobroma cacaoCDS
CDS-auto187803auto187803Theobroma cacaoCDS
CDS-auto187804auto187804Theobroma cacaoCDS
CDS-auto187805auto187805Theobroma cacaoCDS
CDS-auto187806auto187806Theobroma cacaoCDS
CDS-auto187807auto187807Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t022190.1 ID=Tc03v2_t022190.1|Name=Tc03v2_t022190.1|organism=Theobroma cacao|type=mRNA|length=942bp
ATGGCTCATCTTCCCCAATCTCTCTTGCCCATGTCTGCGCTCACTCTCCC
GAAACGACTTGTCGTTTCCTACTCTCTCACTTTCCTTCTTGACCGTTGCA
CAAGATCAAAGAGGCCCTTCTGCTCCAGAATGTCGGCCACGTCATCAACT
CCCCTGACTCACTCCATCTCCTTGCAGAGTCAACTCGGCCAACCCGTCCA
AATTGTTGCCGCTCCTGGCCTATCCGATTCCGGGTTCAGGAGTGCTATTG
AGTCATCTTTATTTAAACAATGGTTAAAGAATCTGGAGAGTGAAAGTGGG
ATTTTGGCTAATGGGGACATGACTTTAACTCAAGTTCTTATTCAGGGAGT
TGATATGTTTGGGAAGCGCATTGGCTTTCTCAAATTTAAAGCAGATATTA
TTGATAAAGGAACTGGAAAGAAGGTTCCAGGTATAGTATTTGCACGAGGA
CCTGCTGTAGCTGTGTTAATTCTTTTAGAGTCAGACGGTGAGACTTATGC
TGTTCTCACTAAACAGGCTAGGGTCCCCACAGGGAGGCTTGTTCTGGAAC
TGCCTGCTGGAATGTTAGATGATGATAAGGGTGATTTGGTTGGCACTGCA
GTTCGTGAGGTTGAGGAGGAGATTGGTATTCAATTGAACCTCGAAGACAT
GGTTGACCTCACAGCCTTCCTTGAGCCATCTACTGGATTCAAAGTTTTTC
CTTCTCCGGGAGGGTGTGACGAAGAAATTGGCCTTTTTCTGTACAGAGGG
CGTGTTGATAAAAACATTATTACACAGCTGCAAGGAAAAGAAACAGGTCT
TCTTGAACATGGTGAGCTTATCAAGGTTTGTGTTGTTCCTTATGAGAAAC
TCTGGCGCATGACACCTGATGCAAAGACTCTGATGGCAATTGCTATCTAT
GAAATGGCCAAAAAAGAAGGATTATTACCTCATAAATCCTAA
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protein sequence of Tc03v2_p022190.1

>Tc03v2_p022190.1 ID=Tc03v2_p022190.1|Name=Tc03v2_p022190.1|organism=Theobroma cacao|type=polypeptide|length=314bp
MAHLPQSLLPMSALTLPKRLVVSYSLTFLLDRCTRSKRPFCSRMSATSST
PLTHSISLQSQLGQPVQIVAAPGLSDSGFRSAIESSLFKQWLKNLESESG
ILANGDMTLTQVLIQGVDMFGKRIGFLKFKADIIDKGTGKKVPGIVFARG
PAVAVLILLESDGETYAVLTKQARVPTGRLVLELPAGMLDDDKGDLVGTA
VREVEEEIGIQLNLEDMVDLTAFLEPSTGFKVFPSPGGCDEEIGLFLYRG
RVDKNIITQLQGKETGLLEHGELIKVCVVPYEKLWRMTPDAKTLMAIAIY
EMAKKEGLLPHKS*
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