Tc03v2_t021390.1

Overview
NameTc03v2_t021390.1
Unique NameTc03v2_t021390.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1167
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Productuncharacterized LOC18606318
NoteUncharacterized protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18606318
GenbankXM_007039865.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g021390Tc03v2_g021390Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p021390.1Tc03v2_p021390.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto186604auto186604Theobroma cacaoexon
exon-auto186605auto186605Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto186606auto186606Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t021390.1 ID=Tc03v2_t021390.1|Name=Tc03v2_t021390.1|organism=Theobroma cacao|type=mRNA|length=1167bp
ATGCGGATGATACCTGTTTTTCGTGACTACCCTAAGGGCTGCAGTCCAAG
GGGAAGATTTGCTACTCAATTCTCTCAACACCTAGTTCAATCAGAGTCGC
CTAGCTCTAGCTCACTGTATGATTCAGAATCTGAGGACTTAGTGGCTTCT
TTATTTGACGATGCGCTTGAATCAGTTTCCTCAGCGGAAGTTGAAGGAAA
AGATGGGTCACAGGCTTTGGATACCACAAGCCCGATTGACCAGTTGGAAA
CTTCCGATCATGAGGCTACAGAATTACCTGAGGAAGTTGTGTCTGAGTCC
ATGCCTACAGATTATGCACCCCGCAAAAAGGTCTTGGCTATCCGGGATTA
TCCTAGAGGCTGTGGTCCGAAAGGAAAATCTCAAACACCATTATCTGAAG
ATTTAGAATCAGAAGGGCCAGACTCTAGCTTGTGGTCTGGTTCAGAATTG
GAGGTCTCTCTTTCGAAGAAGGGACTTGATTCTATAACATCGGCGGAAAG
AGAGACACCAAAGGCTTTGGATGAAATCGAACACATTGACTTGAAAGAAA
CTTCGGAGTCATTAGAGGAAGCTAAATTGGTTTTCAGCAGCTCTTGGTAT
GATTTGGAATCCGAGGACTCAATGGTTTCTATTTATAACTATAGCCTTGA
GTCAGTAGCATTATCAGAAGAAGAACAAGGAATAGATATGCCAAAGGTTG
TAGACTCCATGGGCTTGATTGATCAGTCGGAAACTTCAGAGCCTGAAGAT
CCGATTCTGCCACCCAAGACAATAGACTTAGTAACTATGGATTCTCCCAA
GGGCTGTAGAAGAAGATGTCCTCAAGTTAGGGATGAGAATATCCTGGAAG
CAACTACTTTTGAGACAAATGGATTAAACCATGAGCTGTCTGATGCAGAA
GATCCCTCACTTATAGTACTGAGTGAGTCAGAAGGGAGTTGCTCCACAAA
TACTTGCAGGAGCAATTTACAGGAATCAGAAAATTTATCAGGCCAATGCA
GCAATCAGTTTCGGGAAAAAGGTCCAAGTAGAACGGAACATCGAATGCCT
AAATTGATAGTAACGGGATGGATGGCTGCACGAAACTGCCCATGGAGGGA
AAGGAAAAGAGCATCCAGATCGAATACAACCAGAGATGCAAACAGTAGCA
AAAGAAAGAAGCACTAA
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protein sequence of Tc03v2_p021390.1

>Tc03v2_p021390.1 ID=Tc03v2_p021390.1|Name=Tc03v2_p021390.1|organism=Theobroma cacao|type=polypeptide|length=389bp
MRMIPVFRDYPKGCSPRGRFATQFSQHLVQSESPSSSSLYDSESEDLVAS
LFDDALESVSSAEVEGKDGSQALDTTSPIDQLETSDHEATELPEEVVSES
MPTDYAPRKKVLAIRDYPRGCGPKGKSQTPLSEDLESEGPDSSLWSGSEL
EVSLSKKGLDSITSAERETPKALDEIEHIDLKETSESLEEAKLVFSSSWY
DLESEDSMVSIYNYSLESVALSEEEQGIDMPKVVDSMGLIDQSETSEPED
PILPPKTIDLVTMDSPKGCRRRCPQVRDENILEATTFETNGLNHELSDAE
DPSLIVLSESEGSCSTNTCRSNLQESENLSGQCSNQFREKGPSRTEHRMP
KLIVTGWMAARNCPWRERKRASRSNTTRDANSSKRKKH*
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