Tc03v2_t020460.1

Overview
NameTc03v2_t020460.1
Unique NameTc03v2_t020460.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length861
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productuncharacterized LOC18606210
NoteCysteine/Histidine-rich C1 domain family protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18606210
GenbankXM_018116725.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g020460Tc03v2_g020460Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p020460.1Tc03v2_p020460.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto183921auto183921Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto183922auto183922Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t020460.1 ID=Tc03v2_t020460.1|Name=Tc03v2_t020460.1|organism=Theobroma cacao|type=mRNA|length=861bp
ATGGAAATTTTTAAAAAACACCTCCATAAACATCCCCTGTGGTTCATCGA
GAAGGGAAACCAAAAGTTGTTCTGCACGTTATGTGGGGAACGCTTATCTG
GCTCGGCATACGGTTGCAGCATGTGTAAGATTTTCATCCATGATCACTGT
TCTAAGCTTCCACCCAGTATTGAAAATTTCTTGCACCCATGCCCTCTTGT
CCTCAATATTGTATCGCATGATTACTTGCCCTGTGACTGTACTTTCTGTA
TGCAACCTATCGGCGCATATAGCTATCACTGCGAGGAATGTTATTTTGAT
ATGCATGTTCAATGCGCCCTACAGCCCACCATGAAATCAGAAGGTGAGAA
GCTTATTCAGCACTTCACTCACTGGCATCCTTTAAAGCTTATTCAGAACA
AGGAAGAGGATCAAGTTTGTTGTTTCAAATGTCAAAAGGTGTGCTCTGGT
TCTGCAACTGCTTATGGCTGCGAGAAATGCAAATTTTTCCTCCATGACTC
TTGCATGATCAGCATTCCACGAAAGATCAATCATTTCCTCCACCCATGCC
CTCTCATTTTGTGCACGAGTGGAATCTTTTACACGTGTGGGGGTTGTGAA
GATAGCGGCTCATTCTTGACCTTCAGCTGCAGAAGGTGTCGCTTCGAACT
AGATGTCAAATGCGCCGTACTTCCCACTGTCAAATCTGGAGGTGCCAAGC
AGATTCAACATCCTAGTCACCAACATCCACTAGCACTCCTTGGAAAACAT
AAAGGGCCGTGGTGTTCGATGCAAAGCATGTGGGAAAATTTGTTCAGGTC
TTACAAATACTTTTGGTTGTCGCAGATGCAAGGTTTTTTTCCACAAATCA
TGCGCTGTTGA
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protein sequence of Tc03v2_p020460.1

>Tc03v2_p020460.1 ID=Tc03v2_p020460.1|Name=Tc03v2_p020460.1|organism=Theobroma cacao|type=polypeptide|length=287bp
MEIFKKHLHKHPLWFIEKGNQKLFCTLCGERLSGSAYGCSMCKIFIHDHC
SKLPPSIENFLHPCPLVLNIVSHDYLPCDCTFCMQPIGAYSYHCEECYFD
MHVQCALQPTMKSEGEKLIQHFTHWHPLKLIQNKEEDQVCCFKCQKVCSG
SATAYGCEKCKFFLHDSCMISIPRKINHFLHPCPLILCTSGIFYTCGGCE
DSGSFLTFSCRRCRFELDVKCAVLPTVKSGGAKQIQHPSHQHPLALLGKH
KGPWCSMQSMWENLFRSYKYFWLSQMQGFFPQIMRC*
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