Tc03v2_t019870.1

Overview
NameTc03v2_t019870.1
Unique NameTc03v2_t019870.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length333
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Productphospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
NotePhospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18606147
GenbankXM_007039601.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g019870Tc03v2_g019870Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p019870.1Tc03v2_p019870.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto182755auto182755Theobroma cacaoexon
exon-auto182756auto182756Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto182757auto182757Theobroma cacaoCDS
CDS-auto182758auto182758Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t019870.1 ID=Tc03v2_t019870.1|Name=Tc03v2_t019870.1|organism=Theobroma cacao|type=mRNA|length=333bp
ATGCATGGAAACACATTTACGGCCTTATGTGGTCGCAAAACTCGTGGATT
TGATGCAATCAGGGCTGAGTTGAGGGCATTCTTTGATGTCCATGATCAAG
AAGGGAGCTATCCTGGAGAAGTTCATCTGGAGATGACAGGGCAAAATGTA
ACAGAGTGCGTTGGAGGGTCAATGACTGTGGCCTTTGATGACTTGAGCTC
TCGGTATCACACGCATTGTGACCCTAGGTTGAATGCATCACAGTCATTAG
AGCTAGCCTTTGCCATATCAGAGAGGTTGAGGAGAAGGCTCGAGTCTGCT
AATAAATTTCGCGGTGCTTACAGATGTAATTAA
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protein sequence of Tc03v2_p019870.1

>Tc03v2_p019870.1 ID=Tc03v2_p019870.1|Name=Tc03v2_p019870.1|organism=Theobroma cacao|type=polypeptide|length=111bp
MHGNTFTALCGRKTRGFDAIRAELRAFFDVHDQEGSYPGEVHLEMTGQNV
TECVGGSMTVAFDDLSSRYHTHCDPRLNASQSLELAFAISERLRRRLESA
NKFRGAYRCN*
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