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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 14 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns |
Product | glutamate synthase 1 [NADH], chloroplastic, transcript variant X2 |
Note | Glutamate synthase [NADH], amyloplastic |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc03v2_t016250.2 ID=Tc03v2_t016250.2|Name=Tc03v2_t016250.2|organism=Theobroma cacao|type=mRNA|length=5691bp ATGCTGGATTGGATGCTTTGGATACACTCTCGATTTTCAACAAATACATT TCCTAGTTGGGATCGTGCCCAACCAATGCGTGTCTTGGGCCATAATGGGG AGATTAATACACTCAGAGGCAATGTAAACTGGATGAAGGCACGTGAGGGA TTATTAAAGTGCAAGGAGCTTGGGCTATCAAAGAATGAGATGAAAAAGCT TCTGCCCATCGTGGATGCCAGTTCATCTGATTCAGGGGCTTTTGATGGTG TTCTTGAGCTTCTGGTTCGAGCTGGTAGAAGTCTTCCAGAAGCAGTTATG ATGATGATTCCAGAAGCTTGGCAAAATGACAAAAATATGGATCCTCATCG GAAGGCCCTGTATGAGTATTTCTCAGCTCTAATGGAGCCATGGGATGGAC CTGCCCTGATATCATTTACTGATGGTCGCTACCTTGGAGCTACATTGGAT CGTAATGGACTCCGTCCTGGTCGGTTTTACGTTACACATAGTGGACAAGT CATCATGGCCAGTGAGGTTGGTGTTGTGGATATTCCACCTGAAGATGTGC TTAGAAAAGGAAGACTAAACCCTGGGATGATGCTTCTGGTAGATTTTGAG AAGCATACTGTTGTCGATGACGATGCCTTGAAGCAACAATATTCACTTGC TAGGCCTTATGGTGAATGGCTTGAGAGCCAAAAAATTGAACTCAACAACA TAGTTGATTCAGTTCAAGAATCAGAGAGGGTCACTCCAGCAATAGCTGGA GCGATTCCCGCTTCCAATGATGATGACAATATGGAGCACATGGGAATTCA TGGTTTATTGGCTCCGTTGAAAGCTTTTGGCTACACTGTTGAGGCTTTGG AGATGCTGCTCCTTCCCATGGCTAAAGATGGAACGGAGGCCCTGGGTTCA ATGGGAAATGATACTCCTTTGGCAGTTATGTCCAATCGGGAGAAGCTTAC TTTTGAATATTTCAAGCAAATGTTTGCTCAAGTCACTAATCCCCCGATCG ACCCCATTCGAGAGAAAATAGTGACATCCATGGAATGCATGATTGGTCCA GAAGGGGATCTAACGGAAACAACTGAAGAGCAATGTCATCGTCTTTCACT GAAGGGGCCTCTTTTATCAGTTGAAGAGACAGAAGCAATTAAAAAGATGA ACTACAGAGGTTGGCGTAGTAAGGTTCTTGACATAACTTATTCAAAGGAC CGTGGGAGGAAGGGATTGGAGGAAACCTTGGACAGGATTTGTGCTGAAGC ACGAGATGCAATTAAGGAAGGTTATACGTTATTGGTGCTTTCTGACAGAG CCTTCTCGTCAAAGCGTGCTGCTGTAAGCTCCCTCTTGGCAGTTGGTGCT GTTCATCACCATCTTGTTAAAAAACTTGAACGTACTCGAGTGGGATTGAT AGTTGAATCTGCAGAGCCCCGTGAAGTGCACCATTTCTGCACACTGGTTG GATTTGGTGCGGATGCTATATGCCCATACTTGGCCATAGAGGCCATTTGG AGATTACAGGTAGATGGCAAGATCCCTCCAAAATCTAGTGGTGAGTTTTA CTCAAAGCATGAGCTGGTTAAGAAGTATTTCAAGGCAAGCAACTATGGAA TGATGAAGGTTCTTGCCAAAATGGGAATATCTACTTTGGCCTCATACAAG GGTGCTCAGATCTTTGAAGCTCTGGGTCTTTCATCAGAAGTGATTGAGAA GTGCTTTGCAGGAACTCCTAGCAGAGTTGAAGGAGCAACATTTGAGATGC TAGCTCGTGATGCACTTCATTTGCATGAGTTAGCATTCCCTTCTCGGGCT CTTGCTCCAGGAAGTGCAGAAGCTGTGGCACTGCCCAATCCTGGAGATTA TCACTGGAGGAAAGGTGGTGAAGTACACCTGAATGATCCTCTTGCTATAG CACAGCTGCAAGAAGCTGCTAGGAGCAATAGTGTTGCTGCATACAAGGAA TATGCCAAACGTATTCATCAACTGAACAAATCCTGTAATCTGCGTGGGAT GTTGAAGTTCAAAGAGGCAGGGGTGAAAATCCCATTGGATGAGGTGGAAC CTGCCAGTGAAATTGTGAAACGGTTCTGTACTGGGGCCATGAGTTATGGA TCTATATCATTGGAGGCACATAGTACGCTGGCTATTGCTATGAATAGAAT AGGGGGGAAATCAAATACAGGTGAGGGAGGTGAGCAACCATCTCGTATGG AACCTCTGCCTGATGGTTTGATGAATCCAAAAAGAAGTGCCATTAAGCAG GTTGCGAGTGGGAGATTTGGAGTTTCAAGTTATTACCTTACAAATGCTGA TGAATTACAGATAAAAATGGCTCAGGGTGCCAAGCCTGGTGAAGGAGGTG AACTTCCTGGTCATAAGGTAATAGGAGATATTGCAGTCACCAGAAACTCT ACAGCTGGTGTGGGACTTATCAGCCCACCTCCCCATCATGATATCTATTC AATTGAAGACCTTGCGCAACTAATTCATGATCTTAAGAATTCCAATCCAT CGGCTCGAATCAGTGTGAAGCTAGTATCTGAAGCTGGAGTGGGAGTAATT GCTAGTGGAGTTGTCAAGGGGCATGCTGACCATGTCTTGATATCAGGTCA TGATGGTGGTACCGGGGCCTCACGATGGACAGGCATAAAAAATGCTGGGC TCCCATGGGAACTTGGTTTAGCTGAGACCCACCAAACTCTGGTTGCCAAT GATCTTCGTGGCCGCACTGTTCTCCAGACTGATGGCCAACTTAAAACAGG AAGAGATGTGGCCATTGCTGCACTTCTTGGTGCTGAAGAGTTTGGCTTCA GCACGGCCCCTCTCATAACTCTGGGTTGCATCATGATGCGAAAATGCCAC AAAAACACCTGCCCTGTTGGCATTGCTACTCAAGATCCGGTGCTTCGAGA AAAATTTGCTGGAGAACCTGAACATGTCATTAACTTTTTCTTTATGCTTG CCGAGGAGGTGAGAGAGATAATGTCTCAGCTTGGTTTCCGAACACTTAAT GAGATGGTTGGCCGTTCCGATATGCTTGAAGTTGATAAGGAAGTCCTAAG GAATAATGAGAAGCTTCAGAATATTGATCTCTCCTTATTACTCAGACCTG CTGCTGACATTCGCCCTGAAGCTGCTCAATATTGTATTCAAAAACAGGAT CATGGCTTGGATATGGCTTTGGACCAAAAGCTCATTAAACTATCTAAAGC TGCTCTAGAGAAAGGTCTTCCTGTATACATTGAAACACCTATATGCAATG TGAACCGTGCAGTTGGAACAATGCTTAGCCATGAAGTAACTAAGCGCTAT CACTCGGCAGGGCTTCCTGCTGGTACCATCCATATCAAACTCTCAGGAAG TGCAGGACAGAGCCTGGGCTCTTTCATGTGCCCTGGCATCATGCTGGAGC TTGAAGGCGATAGCAATGACTACGTTGGTAAAGGATTATCAGGTGGCAAA ATTGTTGTTTATCCTCCAAAAGGAAGCCGGTTTGATCCTAAAGAAAACAT AGTAATTGGTAATGTGGCTCTCTATGGAGCTACTAGTGGGGAAGCATATT TCAATGGAATGGCAGCAGAAAGATTTTGTGTTCGTAATTCGGGTGCCAAA GCAGTTGTAGAAGGTGTTGGTGATCATGGTTGCGAGTACATGACAGGTGG GACTGTTGTTGTGCTTGGGAAAACTGGGAGGAACTTTGCCGCAGGTATGA GTGGTGGTATTGCATATGTGCTTGATGTGGATGGGAAATTTCAATCTCGG TGCAATCCTGAGCTGGTAGACCTTGATAAAGTTGAAGAAGAGGAGGATAT TATGACTCTTAAAATGATGATTCAGCAACATCAGCGTCATACAAACAGCC AGTTAGCCAGAGAAGTACTTGCTGACTTTGAGAATCTTCTGCCCAAATTC ATAAAAGTCTTCCCCAGGGATTACAAGCGCGTTCTAGCAAAGGTGAAAGA AGAGGAAGCCTCTAAGGAGGCATTGGAACGTGCTGCAAAAGAAGCTGAGG AGCGAGACGAAGCAGAGTTGGTGGAGAAAGATGCTTTCGAAGAGCTCAAG AAGTTAGCAGCTAATTTGATGAATGAGGAATCAAGTCAGGAAGGAGAGGC CAAACCAGTCAAGAGGCCTTCTCGGGTTTCTGATGCTGTGAAACATCGTG GTTTTGTTGCTTATGAGCGTGAAGGCATCCAATACAGGAATCCTAATGTC CGGATGAATGACTGGAAGGAGGTCATGGAGGAATCAAAACCTGGCCCACT TTTAAAGACACAGTCTGCTCGCTGCATGGACTGTGGTACTCCTTTCTGCC ATCAGGAGAACTCTGGATGCCCTCTTGGAAACAAAATACCTGAATTCAAT GAGCTTGTGTATCAAAATAGGTGGCGTGAAGCACTAGATCGTCTTCTAGA AACAAATAACTTTCCAGAGTTCACTGGCCGAGTGTGTCCTGCACCATGTG AAGGGTCTTGTGTTCTGGGTATTATTGAGAATCCTGTGTCCATCAAAGGC ATTGAATGTGCTATCATAGACAAGGCATTTGAGGAAGGGTGGATGGTGCC ACGGCCTCCTCTCAAGAGAACAGGGAAAAGCATTGCTATTGTCGGAAGTG GACCAGCTGGTTTGGCTGCTGCTGATCAGCTAAATAGAATGGGTCACTCC GTGACTGTGTATGAGCGTGCTGATAGAATTGGAGGGCTTATGATGTATGG AGTCCCTAACATGAAGGCTGACAAGGTTGATGTAGTTCAACGGCGGGTTA ACCTTATGGCTGAGGAAGGAGTTAAATTCGTGGTCAATGCAAATGTTGGA ATTGACCCTTCCTATTCCCTTGACCAGCTACGAGAGGAAAATGATGCCAT TGTTTTGGCAGTTGGAGCCACAAAACCCAGGGACCTTCCTGTTCCAGGAC GGAATTTATCTGGTGTTCATTTTGCAATGGAATTCCTTCATGCAAACAGT AAAAGTTTGCTTGATAGTAATCTCCAAGATGGTAACTATATATCTGCTAA GGGCAAGAAAGTAGTGGTCATTGGTGGTGGTGACACTGGTACAGATTGCA TAGGGACATCTATCCGCCATGGGTGTAGTAGCATTGTAAATCTTGAGTTA CTTCCTCAGCCACCACGAACTAGAGCTCCTGGCAATCCTTGGCCACAGTG GCCTCGCATATTCCGTGTAGACTATGGACACCAAGAGGCTGCTGCCAAAT TTGGTAAAGACCCAAGATCCTATGAAGTTTTGACTAAGAGATTTGTGGGA GATGAGAATGGAACTTTGAAAGGACTTGAGGTGGTACGAGTGCGTTGGGA AAAAGATGCCAGTGGGAAGTTCCAGTTCAAAGAAGTTGAGGGTTCCGTGG AAATAATTGAGGCTGACTTAGTCCTGCTAGCCATGGGGTTCCTAGGGCCT GAGTCGACGGTGGCAGACAAGTTAGGTTTGGAGCAAGACAACCGATCAAA CTTCAAGGCAGAGTATGGTCGCTTTGCAACCAATGTGAATGGAGTCTTTG CTGCTGGAGATTGTCGCCGTGGTCAGTCATTAGTTGTGTGGGCAATCTCA GAGGGAAGGCAAGCTGCTGCACAAGTTGACAAATACCTGACTAGGAAAGA TGAGGACGTAAGTGTTGATGGCGAGAGCCAGAAAGATCTTGTCAAGAGAC ATGAAGACCTTGCTCAGAGGCAGCAAACAGTAATGACATAA back to topprotein sequence of Tc03v2_p016250.2 >Tc03v2_p016250.2 ID=Tc03v2_p016250.2|Name=Tc03v2_p016250.2|organism=Theobroma cacao|type=polypeptide|length=1897bp
MLDWMLWIHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMKAREG LLKCKELGLSKNEMKKLLPIVDASSSDSGAFDGVLELLVRAGRSLPEAVM MMIPEAWQNDKNMDPHRKALYEYFSALMEPWDGPALISFTDGRYLGATLD RNGLRPGRFYVTHSGQVIMASEVGVVDIPPEDVLRKGRLNPGMMLLVDFE KHTVVDDDALKQQYSLARPYGEWLESQKIELNNIVDSVQESERVTPAIAG AIPASNDDDNMEHMGIHGLLAPLKAFGYTVEALEMLLLPMAKDGTEALGS MGNDTPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMECMIGP EGDLTETTEEQCHRLSLKGPLLSVEETEAIKKMNYRGWRSKVLDITYSKD RGRKGLEETLDRICAEARDAIKEGYTLLVLSDRAFSSKRAAVSSLLAVGA VHHHLVKKLERTRVGLIVESAEPREVHHFCTLVGFGADAICPYLAIEAIW RLQVDGKIPPKSSGEFYSKHELVKKYFKASNYGMMKVLAKMGISTLASYK GAQIFEALGLSSEVIEKCFAGTPSRVEGATFEMLARDALHLHELAFPSRA LAPGSAEAVALPNPGDYHWRKGGEVHLNDPLAIAQLQEAARSNSVAAYKE YAKRIHQLNKSCNLRGMLKFKEAGVKIPLDEVEPASEIVKRFCTGAMSYG SISLEAHSTLAIAMNRIGGKSNTGEGGEQPSRMEPLPDGLMNPKRSAIKQ VASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRNS TAGVGLISPPPHHDIYSIEDLAQLIHDLKNSNPSARISVKLVSEAGVGVI ASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVAN DLRGRTVLQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCH KNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEEVREIMSQLGFRTLN EMVGRSDMLEVDKEVLRNNEKLQNIDLSLLLRPAADIRPEAAQYCIQKQD HGLDMALDQKLIKLSKAALEKGLPVYIETPICNVNRAVGTMLSHEVTKRY HSAGLPAGTIHIKLSGSAGQSLGSFMCPGIMLELEGDSNDYVGKGLSGGK IVVYPPKGSRFDPKENIVIGNVALYGATSGEAYFNGMAAERFCVRNSGAK AVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVDGKFQSR CNPELVDLDKVEEEEDIMTLKMMIQQHQRHTNSQLAREVLADFENLLPKF IKVFPRDYKRVLAKVKEEEASKEALERAAKEAEERDEAELVEKDAFEELK KLAANLMNEESSQEGEAKPVKRPSRVSDAVKHRGFVAYEREGIQYRNPNV RMNDWKEVMEESKPGPLLKTQSARCMDCGTPFCHQENSGCPLGNKIPEFN ELVYQNRWREALDRLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKG IECAIIDKAFEEGWMVPRPPLKRTGKSIAIVGSGPAGLAAADQLNRMGHS VTVYERADRIGGLMMYGVPNMKADKVDVVQRRVNLMAEEGVKFVVNANVG IDPSYSLDQLREENDAIVLAVGATKPRDLPVPGRNLSGVHFAMEFLHANS KSLLDSNLQDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCSSIVNLEL LPQPPRTRAPGNPWPQWPRIFRVDYGHQEAAAKFGKDPRSYEVLTKRFVG DENGTLKGLEVVRVRWEKDASGKFQFKEVEGSVEIIEADLVLLAMGFLGP ESTVADKLGLEQDNRSNFKAEYGRFATNVNGVFAAGDCRRGQSLVVWAIS EGRQAAAQVDKYLTRKDEDVSVDGESQKDLVKRHEDLAQRQQTVMT* back to top
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