Tc03v2_t015890.1

Overview
NameTc03v2_t015890.1
Unique NameTc03v2_t015890.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1527
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Productbeta-glucosidase 12, transcript variant X1
NoteVicianin hydrolase (Fragment)
Cross References
External references for this mRNA
DatabaseAccession
GeneID18605702
GenbankXM_018117799.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g015890Tc03v2_g015890Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p015890.1Tc03v2_p015890.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto174090auto174090Theobroma cacaoexon
exon-auto174091auto174091Theobroma cacaoexon
exon-auto174092auto174092Theobroma cacaoexon
exon-auto174093auto174093Theobroma cacaoexon
exon-auto174094auto174094Theobroma cacaoexon
exon-auto174095auto174095Theobroma cacaoexon
exon-auto174096auto174096Theobroma cacaoexon
exon-auto174097auto174097Theobroma cacaoexon
exon-auto174098auto174098Theobroma cacaoexon
exon-auto174099auto174099Theobroma cacaoexon
exon-auto174100auto174100Theobroma cacaoexon
exon-auto174101auto174101Theobroma cacaoexon
exon-auto174102auto174102Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto174103auto174103Theobroma cacaoCDS
CDS-auto174104auto174104Theobroma cacaoCDS
CDS-auto174105auto174105Theobroma cacaoCDS
CDS-auto174106auto174106Theobroma cacaoCDS
CDS-auto174107auto174107Theobroma cacaoCDS
CDS-auto174108auto174108Theobroma cacaoCDS
CDS-auto174109auto174109Theobroma cacaoCDS
CDS-auto174110auto174110Theobroma cacaoCDS
CDS-auto174111auto174111Theobroma cacaoCDS
CDS-auto174112auto174112Theobroma cacaoCDS
CDS-auto174113auto174113Theobroma cacaoCDS
CDS-auto174114auto174114Theobroma cacaoCDS
CDS-auto174115auto174115Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t015890.1 ID=Tc03v2_t015890.1|Name=Tc03v2_t015890.1|organism=Theobroma cacao|type=mRNA|length=1527bp
ATGGCGGCGCCGGGGCGTTGTATACTCCTGTATCACATGGCAAATCAGGG
TCCTTTTTTCTTCATCTGCCTGCTAGCCCTGGGTGCCACCACCAACGGGG
CAAATCCAAACCATTATTCCAAGCCATTTAACCGGAGCAGTTTTCCAGCA
GGTTTCACTTTTGGTGCTGGCTCAGGTGCTTACCAGATTGAAGGAGCAGC
TCTTGAAGATGGAAAAGGGCCAAGTGTATGGGACACTTTCGCTAGAAAAT
ATCCAGAAAGAATTGCTAATCGAAGTACAGGAGATGTAGCTGTTGATTTT
TATCATCGTTACAAGATTGTCCAAGAAATGCTACAGGACGACATAAAGCT
GATGAAGAAAGTTGGTTTGGATTCGTTCAGATTCTCCATTTCATGGTCTA
GGATTTTACCCAAGGGGAAACTTTGTGGAGGAGTAAACCCACTAGGGGTC
CAATTTTATAACAACCTCATCGATGACCTTCTTGCCAATGCTTTAAAGCC
GTTTGTGACTTTACTCCATTTTGATCATCCACAAGCTCTTGAGGATGACT
ATGGAGGGTTCTTAAGTCCCAAGATTGTGGATGATTATGTTGATTATGCG
GATTTTTGCTTTAAAACATTTGGTGACCGGGTCAAGCACTGGGTGACCAT
GAACGAACCAAATGGGTGGAGCCTGGGCGGTGCCAATGGCTCTGCTGCCT
CTTCTCCGACCGAGTCCTATATCTTGGCCCGTCACTTGCTTCTTTCCCAT
GCAGCTGCTGTCAAACTCTACAGGAAGAAGTACCAGGCATCTCAAAAGGG
AAAAATTGGAATTACCATAATAACTAATTGGTTCATACCAAAATCCGATG
CAACTGCTGACCGCAAGGCAGCTTCCAGAGCTCTAGATTTCCTTTTCGGA
TGGTTTGTGGATCCACTAATATTTGGTGAGTATCCAAAGAGCATGCGATC
AATGGTAGGGAGAAGACTGCCCAAATTCACCGAAGCAGAGTCCAAAATGT
TAAAAGGGTCCATCGATTTTCTTGGTGTAAATTACTACACCGCAAATTAT
GCTGAAAATGCTCCTCCATCCAACACTGCCATCGCTGCCAATGATAGCAG
AGTCAATCTCACAACTGAAAAGGATGGAGTTCCAATTGGCACACCGACTG
CTGTGAGCTGGCTTTTCATTTATCCGAAGGGCTTGCGAGGGCTTATGCTT
TACATAAAGGAGAAATATAACAATCCACCCATTTACATTACAGAGAACGG
GGTGGCTGAAGCAAATAATGCTTCATTGACAGTAAAAGAAGCGCTCAAGG
ATAGCACCAGGATAAGATACCTTGATGGCCACCTAAAATCCCTTTTAAAA
GCAATCAGGGAGGGTGTTAACATCAAGGGTTACTACGTGTGGGCGTTTTT
GGATGACTTCGAATGGACTTCTGGATACACCCTTAGGTTTGGGTTCACAT
ACATTGATTTCAAGAATAACTTGAGAAGATACCTTAAATATTCAGCTTAT
TGGTTCAAGATGTTCCTCCTTCATTAA
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protein sequence of Tc03v2_p015890.1

>Tc03v2_p015890.1 ID=Tc03v2_p015890.1|Name=Tc03v2_p015890.1|organism=Theobroma cacao|type=polypeptide|length=509bp
MAAPGRCILLYHMANQGPFFFICLLALGATTNGANPNHYSKPFNRSSFPA
GFTFGAGSGAYQIEGAALEDGKGPSVWDTFARKYPERIANRSTGDVAVDF
YHRYKIVQEMLQDDIKLMKKVGLDSFRFSISWSRILPKGKLCGGVNPLGV
QFYNNLIDDLLANALKPFVTLLHFDHPQALEDDYGGFLSPKIVDDYVDYA
DFCFKTFGDRVKHWVTMNEPNGWSLGGANGSAASSPTESYILARHLLLSH
AAAVKLYRKKYQASQKGKIGITIITNWFIPKSDATADRKAASRALDFLFG
WFVDPLIFGEYPKSMRSMVGRRLPKFTEAESKMLKGSIDFLGVNYYTANY
AENAPPSNTAIAANDSRVNLTTEKDGVPIGTPTAVSWLFIYPKGLRGLML
YIKEKYNNPPIYITENGVAEANNASLTVKEALKDSTRIRYLDGHLKSLLK
AIREGVNIKGYYVWAFLDDFEWTSGYTLRFGFTYIDFKNNLRRYLKYSAY
WFKMFLLH*
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