Tc03v2_t014830.1

Overview
NameTc03v2_t014830.1
Unique NameTc03v2_t014830.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1326
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productpectin acetylesterase 9, transcript variant X1
NotePectin acetylesterase 9
Cross References
External references for this mRNA
DatabaseAccession
GeneID18605578
GenbankXM_018117502.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g014830Tc03v2_g014830Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p014830.1Tc03v2_p014830.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto171345auto171345Theobroma cacaoexon
exon-auto171346auto171346Theobroma cacaoexon
exon-auto171347auto171347Theobroma cacaoexon
exon-auto171348auto171348Theobroma cacaoexon
exon-auto171349auto171349Theobroma cacaoexon
exon-auto171350auto171350Theobroma cacaoexon
exon-auto171351auto171351Theobroma cacaoexon
exon-auto171352auto171352Theobroma cacaoexon
exon-auto171353auto171353Theobroma cacaoexon
exon-auto171354auto171354Theobroma cacaoexon
exon-auto171355auto171355Theobroma cacaoexon
exon-auto171356auto171356Theobroma cacaoexon
exon-auto171357auto171357Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto171358auto171358Theobroma cacaoCDS
CDS-auto171359auto171359Theobroma cacaoCDS
CDS-auto171360auto171360Theobroma cacaoCDS
CDS-auto171361auto171361Theobroma cacaoCDS
CDS-auto171362auto171362Theobroma cacaoCDS
CDS-auto171363auto171363Theobroma cacaoCDS
CDS-auto171364auto171364Theobroma cacaoCDS
CDS-auto171365auto171365Theobroma cacaoCDS
CDS-auto171366auto171366Theobroma cacaoCDS
CDS-auto171367auto171367Theobroma cacaoCDS
CDS-auto171368auto171368Theobroma cacaoCDS
CDS-auto171369auto171369Theobroma cacaoCDS
CDS-auto171370auto171370Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t014830.1 ID=Tc03v2_t014830.1|Name=Tc03v2_t014830.1|organism=Theobroma cacao|type=mRNA|length=1326bp
ATGAAGCTAATGAATATAGCTGCTGTAGCGAGCATACTGGTTTTGTTGGC
TTGCGCGCCATGGTGCGCATACTCGCAGGAGCGGCTCCTTGTTCGGATGA
CTCTGGTTCGAAACGCTCCTGCTCTTGGTGCCTTTTGCTTAGATGGGAGC
CTGCCAGCGTATCATCTACACAGAGGATTCGGCAATGGAGCAAACAATTG
GATTTTGTTCTTTGAGGGAGGTGGGTGGTGCGGACACAGAGAGCAATGCT
TGGACAGAGCCAAAACGAGCTACGGATCAACAAATCACATGAACAAGTGG
GCAATTTTTTCCGGTATCTTAAGTAACAACGCCTCCCTCAATCCAGATTT
TTACAATTGGAACCGAGTGAGGCTGAGATATTGTGATGGAGCCTCATTTG
CTGGAGATGGCAAGTTTGCTAATGGGACATCGTTGCTTTACTTCAGAGGG
CAAAAAATATGGGAAGCAATCATTCTTGATCTTCTACCCCAAGGCTTGGC
AAATGCACATATGGCTTTGCTAGCAGGTTGCTCAGCTGGGGGTCTGGCGA
CCTTTCTGCATTGTGACAACTTCACCAGGATGTTACCGAATGCTAGTGTG
AATTGCTTGAGTGATGCTGGTTTTATCCTGGACGAAAGAGATGTAAGTTT
GAACCACACCGTAAGGTCTATCTTTGAAGATATAGTTTCTCTTCAGGGAG
TAGAGCAAAATCTTGATCCCAAATGCACCAAGTCCATGAACTATCCTAAG
CTGTGCTTCTTTCCACACTATGCCTTGAAATATATCACAACTCCATTTTT
TGTCTTGAACTCTGCTTACGATGTAGTCCAATTTCATCGATTTTTGGTGC
CACCTTCTGCTGATGTTGAAGGAAAATGGAAACACTGCAAGCATGATCCA
GCAGCATGCAGTGCGGACCAGATAGCTATATTGCAAGGTTTCAGGCGTGA
CATGCTTGAAGCATTGAATTTCTTTCTTAAAGATTCACATAGAGGGGGAA
CTTTCATAAATTCATGCTTTGCCCATTGCCAAAGTGATGCACAAGAATCA
TGGTTTGCCGTTAATTCTCCAAGAATACACAATAAGACCATTGCTGAAGT
AGTTGGTGATTGGTACTTCACCAGAAGAGAAGCAAAGGAGATTGATTGTG
AATATCCTTGTGACACAACGTGCCACAACCTAATGCCAGTGCCTCAGGGT
ACGGACTGTGCAAAATGTGGTTCAGTTGGCAACAAAACCTTGACATCAAA
AGCTGGTTCCCATGACAGGATTTGGAGCAAGTACTCAATGATCTTAGTGG
TTTTGCTGTTACCATTATGCCTTTGA
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protein sequence of Tc03v2_p014830.1

>Tc03v2_p014830.1 ID=Tc03v2_p014830.1|Name=Tc03v2_p014830.1|organism=Theobroma cacao|type=polypeptide|length=442bp
MKLMNIAAVASILVLLACAPWCAYSQERLLVRMTLVRNAPALGAFCLDGS
LPAYHLHRGFGNGANNWILFFEGGGWCGHREQCLDRAKTSYGSTNHMNKW
AIFSGILSNNASLNPDFYNWNRVRLRYCDGASFAGDGKFANGTSLLYFRG
QKIWEAIILDLLPQGLANAHMALLAGCSAGGLATFLHCDNFTRMLPNASV
NCLSDAGFILDERDVSLNHTVRSIFEDIVSLQGVEQNLDPKCTKSMNYPK
LCFFPHYALKYITTPFFVLNSAYDVVQFHRFLVPPSADVEGKWKHCKHDP
AACSADQIAILQGFRRDMLEALNFFLKDSHRGGTFINSCFAHCQSDAQES
WFAVNSPRIHNKTIAEVVGDWYFTRREAKEIDCEYPCDTTCHNLMPVPQG
TDCAKCGSVGNKTLTSKAGSHDRIWSKYSMILVVLLLPLCL*
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