Tc03v2_t013670.1

Overview
NameTc03v2_t013670.1
Unique NameTc03v2_t013670.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1359
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productprobable protein phosphatase 2C 75
NotePhosphatase 2C family protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18605447
GenbankXM_007038453.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g013670Tc03v2_g013670Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p013670.1Tc03v2_p013670.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto169153auto169153Theobroma cacaoexon
exon-auto169154auto169154Theobroma cacaoexon
exon-auto169155auto169155Theobroma cacaoexon
exon-auto169156auto169156Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto169157auto169157Theobroma cacaoCDS
CDS-auto169158auto169158Theobroma cacaoCDS
CDS-auto169159auto169159Theobroma cacaoCDS
CDS-auto169160auto169160Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t013670.1 ID=Tc03v2_t013670.1|Name=Tc03v2_t013670.1|organism=Theobroma cacao|type=mRNA|length=1359bp
ATGGCACCACCATCTGAGCTTCTGCTGAAAATCTTTAGCGACGATTTAGA
GAACGAGACCCCAGAGAAGTGCAGAGAACGCCGCCGCAGAAGAATCCAAT
TGAGGAGGTCGAGGTATACCTTTGCACCAATCCAACAACTTCAAAGCCCT
CCACCTCGAAAGGAAATGACAAATTATGTTCCTACTACGGATCAGTATTT
TGCATTATTGAATAGGACTACCCTAGGAGATAAGACGACGGCCATGGCAT
TGCCAGTGGTGGTGGATTCATCATGGACTTCCTTAACCTCTGCCAGCTGC
GGCGCCAAAACGGACGTGAATCCAATGCCGGTAAATGGGTGGATATCGAT
ACAAGGGTTTTCTGATAGTATGGATGACAGATTGTTTGTGAAGGAAGAGT
TTTGCCGTTCAGATTTATTTGGTGGGAAGCCACTGCATTTCTTTGCTGTG
TATGATGGACATGGTGGACCTCATGTCTCGACTCTCTGCAAGAACATGAT
GCATACAATCATGGCAGAGGAGCTGATGCGGCTTTCGACAGAAAAAGCAC
CCGCAACCAGCGATGGCGGCGGTAGCAGCAGCGGCAATGGCACTGGCAGC
TCCTCTCCAGCAGAAAGAATTAAAAACGCAGAGGTGGGTGGAGTGGAAGA
GTGGGAGAATTTAGTGCGGGCAGCTTTAGAGAAAAGCTTCCTGAGGATGG
ATGAGGTGGCACTGAGCACGTGCGCTTGCGGAAAATCCGCGTACCTAGGC
GGGTGCCAGGCCGTGGATGTGGGTTTTTTGGGGTCCACTGCTGTCGTTGC
AATCGTCGCCCCTCATCACGTGGTTGTCGCCAACTGCGGTGATTCACGCG
CCGTTCTCTGCCGTGCTGGGAGAGCCATTCCTCTCTCTCTGGACCACAAG
CCTGAGAGGCCAGACGAACTGGAGAGGATTCGAGCAGCAGGGGGTAAGCT
TGTTTATCAAAATGGGGTTCGAGTTTATGGGATACTTAACATGTCGCGAG
CCCTAGGAGATAACTTTTTGAAGAAAGTCATAACATCACAACCAGAGACT
TCCATCACGGAAAGACACCCAGAAGATGAGTGCCTAATTCTTGCTACTGA
TGGTCTATGGGATGTCATGTCCGATGCTTTGGCTTGTGAGGTAGCTAGCA
CATGTCTTAGGGATGGAAGTTGTGCCACTTCACCTAGGAGCCACTATTCA
GGGCAGTCAGTCAAAATTGATGGTGAAGTGTTGTTTCCATCTAAAAGTGC
TTTTGCAGCAGCAATACTTTGTCGCCTTGCTCTAGGACGAGGGAGCTGTG
ATAATATCAGTGTCATAGTTGTTGATTTGAAGAAGCATTTAGCGGGGAAG
GCAAAGTAA
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protein sequence of Tc03v2_p013670.1

>Tc03v2_p013670.1 ID=Tc03v2_p013670.1|Name=Tc03v2_p013670.1|organism=Theobroma cacao|type=polypeptide|length=453bp
MAPPSELLLKIFSDDLENETPEKCRERRRRRIQLRRSRYTFAPIQQLQSP
PPRKEMTNYVPTTDQYFALLNRTTLGDKTTAMALPVVVDSSWTSLTSASC
GAKTDVNPMPVNGWISIQGFSDSMDDRLFVKEEFCRSDLFGGKPLHFFAV
YDGHGGPHVSTLCKNMMHTIMAEELMRLSTEKAPATSDGGGSSSGNGTGS
SSPAERIKNAEVGGVEEWENLVRAALEKSFLRMDEVALSTCACGKSAYLG
GCQAVDVGFLGSTAVVAIVAPHHVVVANCGDSRAVLCRAGRAIPLSLDHK
PERPDELERIRAAGGKLVYQNGVRVYGILNMSRALGDNFLKKVITSQPET
SITERHPEDECLILATDGLWDVMSDALACEVASTCLRDGSCATSPRSHYS
GQSVKIDGEVLFPSKSAFAAAILCRLALGRGSCDNISVIVVDLKKHLAGK
AK*
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