Tc03v2_t013660.1

Overview
NameTc03v2_t013660.1
Unique NameTc03v2_t013660.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1266
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productprobable protein phosphatase 2C 75
NoteProbable protein phosphatase 2C 75
Cross References
External references for this mRNA
DatabaseAccession
GeneID18605446
GenbankXM_007038452.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g013660Tc03v2_g013660Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p013660.1Tc03v2_p013660.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto169142auto169142Theobroma cacaoexon
exon-auto169143auto169143Theobroma cacaoexon
exon-auto169144auto169144Theobroma cacaoexon
exon-auto169145auto169145Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto169146auto169146Theobroma cacaoCDS
CDS-auto169147auto169147Theobroma cacaoCDS
CDS-auto169148auto169148Theobroma cacaoCDS
CDS-auto169149auto169149Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t013660.1 ID=Tc03v2_t013660.1|Name=Tc03v2_t013660.1|organism=Theobroma cacao|type=mRNA|length=1266bp
ATGACGGAGGTTTATAGGAGAATGCTGAGCGAAGACGATGATGATTCGCC
GGCCAAGTGCCGGCAACGACGGCGCCGGAGGATCCAGATGAGGAGGCTTG
CGGCAATTTCAGTGTCTAGTACGGCGGCGTTTCCGAGTCAGAGACAAAGG
GAGGATCATGCAGAGAGCTCAGGTTGCTTTCCGGAGGGGAAGCGACTACG
TATGGGGGAGGCCAGCGGTCTGCTAGCGACTGTCACCATGTGTACTTTTT
CCGGCGAGGAGGTTGAGCCGACGGCCGGGGAGCGGAAAGTGACTATGACG
AATGGGCCTGTGTTCGGGACGATGTCGATTTCTGGGAGGTCACGTGAGAT
GGAGGATGCCATTTCTGTACGGACCAGCTTCTGCCGGCCCGATGTTAATC
TTAAAAGACCTGTGCATTTCTTCGCTGTTTATGACGGTCATGGTGGCCCT
CATGTGGCAGCACTGTGCAGGGAAAAGATGCACGTGTTCGTAGAGGAAGA
GTTGATGGGCGTGAAGTGCACAGGAGAGAGCGAGTGTGGGAGAGACAGCA
GCTCACAAGAGGATGAGCACGAAGAGAGTTGGAGAAGAGTGATGAAGAGG
AGCTTTGAGAGAATGGATGAGGTGGCAATAAGCACTTGCGCATGTGGGAT
TGTGGGGCACCAGTGTGGGTGCCACTCAATGGAGGTGGCCCTCGGTGGGT
CCACCGCCGTGGTGGCCCTGTTAACGTCGGAGCACATCGTGGTCGCAAAT
TGCGGGGACTCACGCGCCGTCCTCTGCCGCGGCGGGAAGGCCGTACCTCT
AAGTGTCGATCACAAGCCGGACAGATCAGATGAGCTTGCACGAATTGAAG
CTGCCGGAGGTCGGGTTGTCTTTGTAAATGGAGCACGAGTTGAAGGCATT
CTTGCTATGTCTAGGGCAATAGGAGACAAATACCTGAAACCGGTTGTAAC
ATCAGAACCCGAGATAACATTTACTAAGAGAGAACCAGAGGATGAGTGCT
TAATTCTTGCAAGTGATGGTCTGTGGGATGTTCTGTCTTGTGACTTGGCT
TGTGAAGTGGCTCGCGAATGTCTTAAAGAAGGAAGTAATAGTGCTACTGC
TTCTGCATTGAACCTCAATGCAGGACCGAACAAAGAAGATGAAGGGGCTG
AAACATTGTATCCATCTCGAAGTGTTCTTGCTGCTGCACTGCTTACTCGC
CTAGCTTTGGGACGAAAAAGTTCTGATAACATTAGTGTCATTGTTGTTGA
TCTAAAGGAAAGTTGA
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protein sequence of Tc03v2_p013660.1

>Tc03v2_p013660.1 ID=Tc03v2_p013660.1|Name=Tc03v2_p013660.1|organism=Theobroma cacao|type=polypeptide|length=422bp
MTEVYRRMLSEDDDDSPAKCRQRRRRRIQMRRLAAISVSSTAAFPSQRQR
EDHAESSGCFPEGKRLRMGEASGLLATVTMCTFSGEEVEPTAGERKVTMT
NGPVFGTMSISGRSREMEDAISVRTSFCRPDVNLKRPVHFFAVYDGHGGP
HVAALCREKMHVFVEEELMGVKCTGESECGRDSSSQEDEHEESWRRVMKR
SFERMDEVAISTCACGIVGHQCGCHSMEVALGGSTAVVALLTSEHIVVAN
CGDSRAVLCRGGKAVPLSVDHKPDRSDELARIEAAGGRVVFVNGARVEGI
LAMSRAIGDKYLKPVVTSEPEITFTKREPEDECLILASDGLWDVLSCDLA
CEVARECLKEGSNSATASALNLNAGPNKEDEGAETLYPSRSVLAAALLTR
LALGRKSSDNISVIVVDLKES*
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