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Properties
| Property Name | Value |
|---|
| Model evidence | Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns |
| Product | uncharacterized protein At3g06530, transcript variant X2 |
| Note | Uncharacterized protein At3g06530 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc03v2_t012410.2 ID=Tc03v2_t012410.2|Name=Tc03v2_t012410.2|organism=Theobroma cacao|type=mRNA|length=6525bp
ATGGCGAGTTCAATAGCTTCGCAGTTACAGGCGATTAAATCGTTTATTCA
AGCCGACTCTGAACCTCAAAAGCGACCTTTCACTCGCCCTTCCATTTTGT
TTAACCCTAAAGAAGCCGCCGACATCGACATCGACACTATTCTGAACATT
GCGTTGTCAGGGCTAGAGGTTCTAGTAGGTGTCGATGACAGATTTAGGAA
CTACAAGAATGATTTGTTCAGTCACAAGAGTAAAGAATTGGATAGAGAAT
TAATGGGAGTAGACGATAATAATCAAATTAATGATTCAATAAGTTCATAT
TTGCGGTTACTCTCGGGGCATCTTCAACATGCTGCATCTCTTAAAACACT
TGAGTACTTGATACGTCGATACAAGATTCATGTTTACAATATTGAGGATT
TGGTCTTATGTGTCTTGCCATACCATGACACACACGCTTTTGTTCGTATA
GTTCAGTTAATCAACACAGGGAATAGTAAATGGAAATTTTTGGACGGTGT
TAAAGTGTCTGGTGCACCACCTCCTAGGGCTGTTGTAGTGCAACAATGTA
TTCGAGATATGGGGGTTCTGGAGGCCTTGTGCAATTATGCATCTGCAACG
AAGAAGTTTCAGGCTTCAAGACCTGTGATTAGCTTTTGCACTGCAGTTAT
TATTGAGGTTTTGGGTTCTGTTACAGCTATTGACACTGACACTGTGAAGA
GAATCCATCCATTTGTAGCTTCTGGTCTCCAAACTGGTACAGAAGGAGGT
TCTGATCACAAGGCTGGTGCTTTGATGATTGTTGGGTTACTAGCAAATAA
AGTAGCATTGTCTCCCAAACTTGTAAATAGTTTGATTCGATCAGTTGCTG
AGGTAGCTAGGAAAGACGTGAAAGAGTCAACTGACTTGCTATGGCTTCGG
TTGTCACTTATGGCTCTAATAAATCTTGTTCAGTCACAGTCTGTTGATAC
ATTCCCAAAGAAGGCTTTGGAAATTTTAAGGGATATCAGGGATATTGCTG
GGATTCTTCTGGAACTATCTAAAGATTTTAATATTGATAGATTTCTCACT
ATTCTGTTGGAAGCTCTGGTCGATCAAAGTTCTTCTGATGACTCATATCA
TCTTGCTTTAATATCAGTAATAGATACAGTTCCTCTGACGAATTTAGTGG
ATCATATTGTCTCCAAGATTCTACTTTGCTGCATGAGATTATCAGAGAAG
GATGGAAATTCGGCATCCTCTGAATCAGGAACCTGGGCTAAGAAAATTTT
GGCTGCTATTCATAAGAATTATCCATCTCAATTTCATGGAGCAGTTCACA
AGTTCCTAGAGGATACCAAAGTACAATCCAAGAAAGAGGACACAGTGTGT
GAGTTCTTGAGTAAAATATTGGATGGGAATTTGGATTTGTCAATGGTTGT
CCCAGAGTCCAAAATATGGTTTGCATCACACCATCCAAAGCCTGAGGTAC
GGCGTGCTACATTTTCAGGGCTTAACCGATCTGCTATTCTGAAACTGAGG
TCTCTTGATCCGCAGAGGCTTGTAACCATTAAAGATGTCATACTGCGCCA
GCTTCACGATGATGATTTAACTGTCGTTCAAGCTGCTCTTTCTCTGGATT
GGTTCACTGAAATAATAAGTCCTTTAGAACTTCTTGAAGCATTGCATCAT
GTGCTTAAGAGATGTCTAAGCTTTCTGACATCAGGTTCATCAGTTAATTC
TACTTTATCTTGTGACGTTGCTGTTTCATTTCTAAAGGTTGCTGTTTTCA
GCTTCCATGATCAGATAGATTATTTGAAAGAAGTTGCTTCCATGATATTC
CCACTGCTACTAAATCTGCCAGAGACTCAGAGGTTGAGTTTAAAGGTTTT
GGATTTAGCCAAGGAAGTGAAGTGGCCATTTTTCCAGACTCTTGCTGCTG
TGTCTGGCGAGGATGTGAAATTGCTTTCTGGATCTTCAGTTGACATGGAG
CCTGTTAGCAGATTTGAAAAGAAAATGCAGAAGCGTGGAAGCGTATCTAC
AGTTAATATTGAAATTGTTGGAAGTTTATCAGAAGCATTCTTGATGAACC
CTCATGAGTACTTGCCTTGGCTTACCAGGAGTTGCAGTGATCTTAAGTCA
TCAAAGACTCTTTGCTTTCTGGTTCTGATGCAGTCATTTTCTATGTCGAA
AAACAATGGCAAATTTTTGGTGCTTTTCGAAGCTTGCTTTCCAGTTTTGA
AGTCTGAGTGGGAGGCTTTTGGGTCTGTAGTTGACGCTTCTCTACAAGAG
TTCAATGAAGAGATGCTTGATTGGGATTGCAGAAAGTTCCTAGATCAGCT
GTTTGTTGCTGATATTGATTCTCTAAACACATATATTCTTATATGCATAT
TCTGGAGGTTACTTGAGGCATTTATTTCAGCATCCTCTACTGAAGTCTTT
TTGGATGATAGTGAGAAGGCTATTAACCGAGTTCAGGATTTCTTCATCTT
CGTTGCGGTCTCTAATTTGAAGTATGCATTCAAGAAACGCCTTCGAGACC
TTGTTGAGAAACATCTTCATGATTTTCTTACAAAGTGCAAGATTTCACCA
GTTCGATTTCTGTCTAGCTTTTTTACAGCAGAAGATGTTCCCTTTGCAGT
TCAAGTAGAGAGTCTTCACTGTTTCGCATTTCTTTGTTCTCAGCTAGATG
ATAGACTACCATTTGAACTTTTGGCTGAATTTCCTTCACTTCTTGTTCCA
CTTGCCAGGGAGAATCAGGCTACTAGGTTTGCTGCCATGGACTGTATTGA
AAAGTTACATAAATTGTGGTGTCAAGTTGACTTTTCTAGCAAGAAAAATG
GAAACACTGCAGTTTGGAGCCATTTTCTTGATGAACTTTTGGGCTTGATG
GTTCAACAGAAGAGGCTTATATTGTCAGATAAAAATTTCCTCCCTTCTTT
TCTGACATGTTTGCTTAGCTCATCCTGTGATAGCATTCTAGTGTCTCCAA
ACATTGAGCAGAGATTTAATCAATCTACAAAGGAAAAGATTCTTGCTTTC
ATATTGAGTTCTGCCCTAAAGCTTTCCGGATCTGGCAAGCTAAAGGTTCT
ATCTTTGCTTAAAGGATTAGGCAACACAATTCTGCATGTTAAAGAAGTTG
AGTCATTGTTATCCCTGCTTCTGAGAAAACACAGCCAATACCATTTAGAC
CTGGAAAATTCATCCCTGAAATTGTCAGAAATTGAAATCAGGATCCTCTG
CTTGCTTTTGGAGATTTGTGTTATGCCTTCATCGTTGCTCGGTGGACAAA
TTTCTGAAGATTATGTGTTAAAGGCATTGCAATTGGATTTTAAGTCTCCA
GAAGACCCTGCCATTATAGAACCCTGTGTTACAGTTTTGCAAAAGCTAAG
CAATCAATTCTACAGTGGCTTGACAACTGAGGCACAGGGTCATCTGTTCC
GACAGCTAATACTTTTGTTTCACAATAGTAATGGTGATATCCGAAGTGCA
ACCAGAGATGCTTTGCTGCGTTTAAATATTGCTTCCTCTACAGTAAGTCA
GATGCTTGATCTTGTTCTGAAAGAGGATCCACTTGTAACTAGTTCAGCAC
ATGGAAAGAAGAAAAAAAAATTAGCTGGAAATCTAAAGGCCGGCTATCAT
TGTGATATAGTTTCTAGAGGAGAATGGTCTCTCTCTTTTCTTAGCTCCCT
TCTTGATGCGTTGCTTCTGAAGAAAGACATAGCAAACAGGCAGTTTCTCG
TGGGTCCCTTATTTAATCTTCTTGGAAAAATTTTCTCTGATGAATGGGGA
CATGGTGCTCTCACTCAAGATGAAAGGTTGATACAAACTTCTGGTGTGTC
TCAGACAATGTCTAGTGCAATTTGTTACATTCAGCAGGCATTATTGTTAA
TTTTGGAAGATATTTTTGCTTCATTCATTAATGCAAATAGTCCCCTAAAG
GCTGGCATAATAAATAAAATTGATATCCAAATACTGGTTGATTGCGCTCG
TTTGATAGAGGATGGAGAAACCCGTAACCATGTTTTTACACTGTTATCCT
CAGTGGTGAAGTTAGTTCCAAATAGAATATTGGAGCACACATTGGATATA
CTTACTGTCATTGGAGAATCAGCAGTTTCACAGATTGATAGCCATTCACA
ACATGTGTTTGAAGATCTTATATCTGCTATTGTTCCATGTTGGCTGTCTA
AGACCAACAACACAGAAAAATTGCTTGAGATTTTTATAAATATATTGCCT
GGAGTGGCTGAGCATAGAAGGCTGTCCATTATTATATTCCTCTTGAGGAT
TTTAGGGGAGACTGATAGTTTGGCCTCATTGCTTGTCATCCTTTTCCGTT
CGTTAGTTTCAAGAAAAGGACTATCTTGCCTTAATGCTACACACGCTTCA
GATAGATTTTCTGCACAGAAAGAGTGGGAGTATGCCTTTGCAGTGCAAAT
ATGTGGACAGCATTCATCCCTGATATGGCTTCCTTCTCTTGTAATGGTTC
TTCAATTAATAGGACAGAGTGATCTCTCTCAAGAACTGGTTATGCAATTG
TTGTTTGCCATGGATTTTGTTTTGCACAAATTGCAAGACCCAGAATTTTC
TTTGAAGCTTGAATCAAGGGAGAGTTCAGATAGCATCCAGAGAAAACTTG
GAGAACTTATGGAGCAGGTTGTCTCTCTCTTACAAGTTGTTGATGCAAGA
AGAAAGCAAATTGGCATTCCAGTTGCAACTTGGAAAGACTTTAGGGCATG
CGTGGATGCTATCTTGAAGACTATTACAATGACTATGATCCCTTCCACAT
GCTTTGAATGCATCACCAAATTACTTGGCAATGCGGATGGCACTGTTAGA
AAGAAGGCTCTTGGGATATTATGTGAAACAGTGAAGGACCATGGTTCGGT
TAAATCAAAGCGCAAGGAGAAAAGAGAACTGGATCTAAATTCAAATAGCT
TTGAGCTCCATTTGGATGATACTTCTCTGGAATTGTTTCAGAAGATGTGT
GCAGAAATTGTTCAGATAGTTGATGATTCTATTGAAAAATCAAATGCTTT
GTTGAAACTGGCTGCAATTTCAACACTGGAAATCCTGGCACAAAGGTTTT
CTTCTAATTATTCAGTCTTCAGCATGTGCCTTGCATCAGTCACAAAAGGC
ATTAGTTCAGAGAACTTGGCTGTCTCATCCAGCTGCCTTAAGACCACTGG
TGCTTTGCTTAATGTGCTTGGACCAAGGGCACTGGCTGAGCTTCCCTGTA
TAATGGAAAATGTTATAAAGAAGTCTCGTGAAATTTCTGTGAGTTCTGAA
TTAAAAAGCAAGACTGATGAAAATAGCTCCATTTTGCTGCTTATTCTTGT
CACTTTGGAGGCAGTTGTTGACAAGCTTGGTGGCTTTTTAAACCCATATC
TTGGAGATGTCATAGAACTTATGGTACTTCATCCTGCATATGTGTCAGGA
TCAGATCTGAAGCTGAAATTGAAAGCTGATTTAGTGCGAAAGCTCCTTAC
TGATAAGATCCCTGTTCGACTTACACTGCAGCCTTTGCTAAAGACATACT
CGGGTGTTGTTAAATCTGGAGATTCAAGCTTGGTGATTGCTTTTGAAATG
TTAGCAAACCTAGTTACTAAAATGGACAGGGCATCAGTTAGTGGTTACTA
TGGAAAGATTTTTGACCAGTGCATGCTTGCTTTTGATCTTCGCCGGCAGC
ACCCTGTGTCAGTTCAGACTATTGATGTGGTAGAAAAAAGTGTCATCAAT
GCGTTAGTTTCTCTTACGATGAAACTTACAGAGAACATGTTTAAACCTCT
TTTTGCCAAGAGTATTAAGTGGGCTGAGGCAGAGGTTGAAGATGTTGCTG
GGAGTGGAAGCCCAAATATAGATAGAGCTATATCATTTTATAGCCTGGTA
AATAAACTTGTGGAGAATCATAGGTCACTCTTTGTCCCCTACTTCAAATA
CTTGGTCAAGGGTTGCATACAGCTGCTTGGTGATTTTGGAGTTTTTAAAG
CTTCTAATTTGGTTCAGAAGAAAAAGAAAGCCAAGATTCAGGACGGGAAT
TTGGGAAACCACATGTTATCACTTAAAAGCTGGCATCTTAGGGCATTGAT
CTTATCATCACTGCAAAAATGTTTTCTCCATGACACTGGGAGGCTGAAGT
TCCTTGACTCATCTAATTTTCAGGTTCTATTGAAACCCATTGTTTCTCAG
CTTGTCATTGAGCCCCCAACTTCAATTGAAGAACATCCTGATACACCGTC
AGTGAAGGAAGTAGATGACTTGTTAGTTGGTTGCATAGGTCAGATGGCTG
TTACTGCCGGAACTGACCTCCTGTGGAAGCCCCTGAACCATGAGGTGTTG
ATGCAAACACGTAGTGAGAAGATGCGAGCTCGAGTTTTGGGCCTGAGGAT
AGTTAAGCAGTTTCTGGATAATCTGAAAGAAGAATATTTAGTACTCCTGG
CTGAAACCATCCCCTTTCTCGCGGAACTGCTGGAGGATGTGGAGTTACCT
GTTAAATCTTTGGCACAAGATATTCTCAAGGAGATGGAGACGATGAGCGG
TGAAAGCCTTCGTGAATACCTGTGA back to topprotein sequence of Tc03v2_p012410.2 >Tc03v2_p012410.2 ID=Tc03v2_p012410.2|Name=Tc03v2_p012410.2|organism=Theobroma cacao|type=polypeptide|length=2175bp
MASSIASQLQAIKSFIQADSEPQKRPFTRPSILFNPKEAADIDIDTILNI
ALSGLEVLVGVDDRFRNYKNDLFSHKSKELDRELMGVDDNNQINDSISSY
LRLLSGHLQHAASLKTLEYLIRRYKIHVYNIEDLVLCVLPYHDTHAFVRI
VQLINTGNSKWKFLDGVKVSGAPPPRAVVVQQCIRDMGVLEALCNYASAT
KKFQASRPVISFCTAVIIEVLGSVTAIDTDTVKRIHPFVASGLQTGTEGG
SDHKAGALMIVGLLANKVALSPKLVNSLIRSVAEVARKDVKESTDLLWLR
LSLMALINLVQSQSVDTFPKKALEILRDIRDIAGILLELSKDFNIDRFLT
ILLEALVDQSSSDDSYHLALISVIDTVPLTNLVDHIVSKILLCCMRLSEK
DGNSASSESGTWAKKILAAIHKNYPSQFHGAVHKFLEDTKVQSKKEDTVC
EFLSKILDGNLDLSMVVPESKIWFASHHPKPEVRRATFSGLNRSAILKLR
SLDPQRLVTIKDVILRQLHDDDLTVVQAALSLDWFTEIISPLELLEALHH
VLKRCLSFLTSGSSVNSTLSCDVAVSFLKVAVFSFHDQIDYLKEVASMIF
PLLLNLPETQRLSLKVLDLAKEVKWPFFQTLAAVSGEDVKLLSGSSVDME
PVSRFEKKMQKRGSVSTVNIEIVGSLSEAFLMNPHEYLPWLTRSCSDLKS
SKTLCFLVLMQSFSMSKNNGKFLVLFEACFPVLKSEWEAFGSVVDASLQE
FNEEMLDWDCRKFLDQLFVADIDSLNTYILICIFWRLLEAFISASSTEVF
LDDSEKAINRVQDFFIFVAVSNLKYAFKKRLRDLVEKHLHDFLTKCKISP
VRFLSSFFTAEDVPFAVQVESLHCFAFLCSQLDDRLPFELLAEFPSLLVP
LARENQATRFAAMDCIEKLHKLWCQVDFSSKKNGNTAVWSHFLDELLGLM
VQQKRLILSDKNFLPSFLTCLLSSSCDSILVSPNIEQRFNQSTKEKILAF
ILSSALKLSGSGKLKVLSLLKGLGNTILHVKEVESLLSLLLRKHSQYHLD
LENSSLKLSEIEIRILCLLLEICVMPSSLLGGQISEDYVLKALQLDFKSP
EDPAIIEPCVTVLQKLSNQFYSGLTTEAQGHLFRQLILLFHNSNGDIRSA
TRDALLRLNIASSTVSQMLDLVLKEDPLVTSSAHGKKKKKLAGNLKAGYH
CDIVSRGEWSLSFLSSLLDALLLKKDIANRQFLVGPLFNLLGKIFSDEWG
HGALTQDERLIQTSGVSQTMSSAICYIQQALLLILEDIFASFINANSPLK
AGIINKIDIQILVDCARLIEDGETRNHVFTLLSSVVKLVPNRILEHTLDI
LTVIGESAVSQIDSHSQHVFEDLISAIVPCWLSKTNNTEKLLEIFINILP
GVAEHRRLSIIIFLLRILGETDSLASLLVILFRSLVSRKGLSCLNATHAS
DRFSAQKEWEYAFAVQICGQHSSLIWLPSLVMVLQLIGQSDLSQELVMQL
LFAMDFVLHKLQDPEFSLKLESRESSDSIQRKLGELMEQVVSLLQVVDAR
RKQIGIPVATWKDFRACVDAILKTITMTMIPSTCFECITKLLGNADGTVR
KKALGILCETVKDHGSVKSKRKEKRELDLNSNSFELHLDDTSLELFQKMC
AEIVQIVDDSIEKSNALLKLAAISTLEILAQRFSSNYSVFSMCLASVTKG
ISSENLAVSSSCLKTTGALLNVLGPRALAELPCIMENVIKKSREISVSSE
LKSKTDENSSILLLILVTLEAVVDKLGGFLNPYLGDVIELMVLHPAYVSG
SDLKLKLKADLVRKLLTDKIPVRLTLQPLLKTYSGVVKSGDSSLVIAFEM
LANLVTKMDRASVSGYYGKIFDQCMLAFDLRRQHPVSVQTIDVVEKSVIN
ALVSLTMKLTENMFKPLFAKSIKWAEAEVEDVAGSGSPNIDRAISFYSLV
NKLVENHRSLFVPYFKYLVKGCIQLLGDFGVFKASNLVQKKKKAKIQDGN
LGNHMLSLKSWHLRALILSSLQKCFLHDTGRLKFLDSSNFQVLLKPIVSQ
LVIEPPTSIEEHPDTPSVKEVDDLLVGCIGQMAVTAGTDLLWKPLNHEVL
MQTRSEKMRARVLGLRIVKQFLDNLKEEYLVLLAETIPFLAELLEDVELP
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