Tc03v2_t012180.1

Overview
NameTc03v2_t012180.1
Unique NameTc03v2_t012180.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2733
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Productputative disease resistance RPP13-like protein 3, transcript variant X2
NotePutative disease resistance protein At1g58400
Cross References
External references for this mRNA
DatabaseAccession
GeneID18605267
GenbankXM_007038184.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g012180Tc03v2_g012180Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p012180.1Tc03v2_p012180.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto165201auto165201Theobroma cacaoexon
exon-auto165202auto165202Theobroma cacaoexon
exon-auto165203auto165203Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto165204auto165204Theobroma cacaoCDS
CDS-auto165205auto165205Theobroma cacaoCDS
CDS-auto165206auto165206Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t012180.1 ID=Tc03v2_t012180.1|Name=Tc03v2_t012180.1|organism=Theobroma cacao|type=mRNA|length=2733bp
ATGGCTGAAGCTGCCGTTTCCTTTGTTGTAGAAAGGCTAGCCGGCATACT
GGAAGAAATTGATTTTCAAACAGGTGTTCGACAGGAAGTAGAGCGTCTAC
AAGAGGAATTACTTCGGATGAGATGTTTCTTAAAGGATGCAGATGCAAAG
CAAGATGATGATGAGAGAGTGAGCAACTGGGTGTCTGAAATCAGAAATGT
TGCTTATGATGCTGAAGATCTCATCGACACTTTCGTCCTCAGAATTGATT
CCCTCAAGAAAAAAAGCTCCATCAAAAGGTATGCTTCCATTTTCAAAGAA
TGGAAACATCGCTCTAAGGTTGCAAAAGAGCTTCTGTCCATCCAGAGAAG
AATCCTTAATATATCTGCCAGTCGTGAAACCTATGGTATCAGAAACATTG
GAGAGGGGATTAGCACTGCAAGGGAGAGGCTTCGGAAGCTGAGAAGATCA
TCTCCTCGCGGGGAAGAAAAGGATATCGTTGGCCTGGACGATGATATAGC
TAAGCTGGTGACGCAACTTGTCCGAACCGAGGACCAATGGCATGCGATTT
CAATAGCCGGAATGGGAGGCATTGGTAAGACAACTCTAGCAAAAAAAGTT
TATAATCATGGTGATATCCAGGCTCGTTTTCCTTCTCGAGCATGGGTTTA
CGTATCCCAGGATTTCAGTACTAAAGACATACTTCAGGCAATTATAAAGC
AAGTGGCATCAACGCGAAGAAAATTGGAAAAGTTGGAGGAAGAAGAATTG
GAAGCAATTCTCTATGAACACCTAAGAAAGAAACGGTATTTGGTAGTCTT
GGATGACGTATGGAGTATCGGAGCATGGATCTCTCTTGCAAAGGCCTTTC
CAGACAGAAGTAATGGAAGCAGAGTCATGATTACAACTCGCAACAAGGGT
ATTGCTTTGAAAGCAGATGCTCAAAGTGTTCCCTATCATTTGCATTTTCT
GAGCGAAGAAGATGGATGGATGTTGTTCTGCAAGAAAGCTTTCATTCATG
GCGTTGATTCATATCGTTCCCCACAGTTGGAGGAAATAGGGAAAGAGATC
GTGGCAAAATGTGCTGGTTTACCACTGGCCATCATTGTGGTGGGAGGATT
GCTTTCAAGTAAAAGAAATTTGGGAGAATGGAAAAGGGTTCTTTCCAACA
TGAACTCGCTCTTTGCTCGAGACCCAGATGGAGTGTCATCTATTCTAGCT
TTGAGTTATAACGATTTGCCTTATTACCTCAAATCTTGCTTCCTCTATCT
AGGACAATTCCCAGAAGACCGTCTGATTCCCACACATAAAATGTTTAGGC
TATGGATTGCGGAGGGTTTGATTCCGCTGCAAGAGGAAAGGATGGAGCAC
GTAGCAGAGGATTACTTGAATGAGCTAATTGAGAGAAACATGGTTCAAGC
AGCCAAATGGAGTGTCAACCAGAGAGTTAAACAATGTCGTCTTCATGATC
TACTACGAGACCTCTCCATCTCAAAGGCCAAAGCAGAGAGCTTTCACGAG
ATTCAAGGGAGTCAAAGTCTCCACCCTTCAGCTAGATCACGTCGTCATGC
CATCTACTCTACATTTCATTGGCCCCAGTGCAAGTATATCAATCCCCACC
TCCGGTCGCTTCTCTTCTTTAGAGTTGATCGTAACCAAAGCCAGGTTAAT
TATTATATAAATGATCCTTATAAAATGGAAGGCAGCGATCTAGATTATGT
TAGCAGAAACTTCAAATTACTCAGAGTCCTGGAGTTGGAGGGTATACCAT
GTACTACCATTCCAAGCATAATTGGGGCATTAATTCATCTGAAATACTTG
GGGCTGAAGGAGACCAACCTACAGGCGCTTTCACCAGCCATAGGTTCTTT
GCGGAACCTACAGACTCTTGATGTAGCTGCAAATCTTCATCTCGAAACAA
TTCCCAACGTAATATGGAAGATAACAAAATTACGGTATCTTTATATGTGC
GGACATAAATATGGGGGGCCTCTGCGAATCGACACATTACAGCATCTCCA
GGCTCTATCAGAGATAAATGTCCAAAAATGGATGCAAAACAACCCTGCAA
ATTTAACGAGCCTGCAAAAATTGGGAATCAGAGGAAACTTCAGCTTGAGA
GCAACTGAAATATTTAACTCTATTGTGGCACTTGTACAACTTCAGTCCCT
GTACCTGCGTACTGAAGATGCTGAATTTCCATCGCTCACTCAACTTTCTG
CTCTTCAAAATCTCGTCAAGTTGCATATGAGAGGAACTATAAGACAGTTA
CCTAGCTCGCAGGAATTCCCACCAAATCTCTCCCAGTTGACATTAGAACA
TGCTCATCTCAAGCAAGATTCGGTGGGGATACTTGAGAACTTGCCAAGAT
TGTTGATTCTGAGACTAAAAGCACGCTCCTACGATGGAGTGAAAATGGCA
ATATCCGTCAGTGGCTTTCCTCAACTTGAGTTCCTGGAGTTTCACTCCTT
GGAATCCTTGGAAGAGTTAAATCTTGAAGAAGGTGCAGCGCTAAGGCTTA
GGAGTTTCCGGATAATCAATTGCGGGAACTTGAAGATGCTCCCTGAAGGA
ATGAGATCCCTTGCTGCTCTCTGTGAGTTGGACATTGAAGAGATGCCAAA
ATCATTCGTGAATAGGATTCGAGGTGAAGATTTTTACAAGTTAATCAAGC
AATCAGACCGCTCCTCCTCGTCAGATGTTGAAAGATTTAACACAGGGGAG
CTACGAAAGGTCCAAAGTGTCATGAATGCATAG
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protein sequence of Tc03v2_p012180.1

>Tc03v2_p012180.1 ID=Tc03v2_p012180.1|Name=Tc03v2_p012180.1|organism=Theobroma cacao|type=polypeptide|length=911bp
MAEAAVSFVVERLAGILEEIDFQTGVRQEVERLQEELLRMRCFLKDADAK
QDDDERVSNWVSEIRNVAYDAEDLIDTFVLRIDSLKKKSSIKRYASIFKE
WKHRSKVAKELLSIQRRILNISASRETYGIRNIGEGISTARERLRKLRRS
SPRGEEKDIVGLDDDIAKLVTQLVRTEDQWHAISIAGMGGIGKTTLAKKV
YNHGDIQARFPSRAWVYVSQDFSTKDILQAIIKQVASTRRKLEKLEEEEL
EAILYEHLRKKRYLVVLDDVWSIGAWISLAKAFPDRSNGSRVMITTRNKG
IALKADAQSVPYHLHFLSEEDGWMLFCKKAFIHGVDSYRSPQLEEIGKEI
VAKCAGLPLAIIVVGGLLSSKRNLGEWKRVLSNMNSLFARDPDGVSSILA
LSYNDLPYYLKSCFLYLGQFPEDRLIPTHKMFRLWIAEGLIPLQEERMEH
VAEDYLNELIERNMVQAAKWSVNQRVKQCRLHDLLRDLSISKAKAESFHE
IQGSQSLHPSARSRRHAIYSTFHWPQCKYINPHLRSLLFFRVDRNQSQVN
YYINDPYKMEGSDLDYVSRNFKLLRVLELEGIPCTTIPSIIGALIHLKYL
GLKETNLQALSPAIGSLRNLQTLDVAANLHLETIPNVIWKITKLRYLYMC
GHKYGGPLRIDTLQHLQALSEINVQKWMQNNPANLTSLQKLGIRGNFSLR
ATEIFNSIVALVQLQSLYLRTEDAEFPSLTQLSALQNLVKLHMRGTIRQL
PSSQEFPPNLSQLTLEHAHLKQDSVGILENLPRLLILRLKARSYDGVKMA
ISVSGFPQLEFLEFHSLESLEELNLEEGAALRLRSFRIINCGNLKMLPEG
MRSLAALCELDIEEMPKSFVNRIRGEDFYKLIKQSDRSSSSDVERFNTGE
LRKVQSVMNA*
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