Tc03v2_t012150.1

Overview
NameTc03v2_t012150.1
Unique NameTc03v2_t012150.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1233
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Producthistone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5
NoteSU(VAR)3-9
Cross References
External references for this mRNA
DatabaseAccession
GeneID18605264
GenbankXM_018116696.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g012150Tc03v2_g012150Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p012150.1Tc03v2_p012150.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto165177auto165177Theobroma cacaoexon
exon-auto165178auto165178Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto165179auto165179Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t012150.1 ID=Tc03v2_t012150.1|Name=Tc03v2_t012150.1|organism=Theobroma cacao|type=mRNA|length=1233bp
ATGCCTTTTGATTCCGAGGACCGTCATTCAGCTTATGGGATCCCTATGGC
AGATTGCGAGCAATTGGATGCTTCTAATGCAACTAATGTTCATGCATGCA
GGGATACTAAACAGTACGACTTCTCATTAGTTAGGAACTCCAAGCCATTG
TATGTTCCTAATTCAACTAATGTTCGTGATATTCATGCGTGCATAGAACC
TAAACAAGGTCATGTGTCAATGGTTGATAAAGATTGCAAACCAATGGATG
TTTCCATTGCAACTAATGTTTTTGCATGCAGTGATGTTAAAGAATCCAGC
CCATCAATGGTGGTTGCGGATGAGCAATACGGGGTGGATAACTATCAAGG
AGTTTTAAAGGATGATGAGGGAGATGAAGTCCCATCTAGTGCTAAACAAG
CGAGTTTATCAAAGGTTGTTTGGAATGAGCAATGTCTGAATGTTGACTTT
AGTGATGAGGAGTGCGAGGAAGACTTAATGGAGGCATATAATTCCCAAGT
AATTGTTAGCGAGGACTTGGCGGTCACTGACAACAAGGAGTTGAGAATTG
CTTCGGAGAAGGTTAAGGAGGTTATACATCTTTTTAGAGAGATTTACCTT
AAGCTCTCACAAGAAAGTGATGGAAAACAAAAACAAATTCTTCCTCTACT
AGCAGCTTCGCATCTTCTAAAGCAGCAAAAGTGGATCAACATGCATAAGC
GGTTAGGTCCTATACCAGGAGTTAAAGTAGGTGACTATTTTTCTTGGAGG
GCTGAATTGAATATAATTGGCCTCCACCGTCAACATATGTGTGGCATAGA
TTATATGGAGTTGGATGGGAGAATACTAGCTACAAGCATTGTGGACTCTG
GTCGATACGACAATGTTGTGGAGTCAAATGATGAACAAGAATTTCCAAAT
GTCCTAATTTATTCAGGGCAAGGAGAAAATCTGAAGTTTCGAAGTAGGAA
ACTTGTAAATGACCAAAAACTTGAAGGAGGAAACCTTGCATTGAAGAATA
GTGCGGAAACAAAAACCCCGATAAGGGTTATTCGTAAGTTTTGCTTTAAA
GGTGCTAGTAGTAAGATTGTTGACTGTAAGTATGTTTATGATGGGTTGTA
CTTTGTGGATGGTTATCGAGAAGAAAAAGCATCATCACGTAAGCTTGTTT
TTAAGTTTGTTCTAAAGAGATTTCCAGGGCAACCAAAACTTTGGGCAAAA
ATTGGTTCGGAAAGAACATGTTTGTATGAATGA
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protein sequence of Tc03v2_p012150.1

>Tc03v2_p012150.1 ID=Tc03v2_p012150.1|Name=Tc03v2_p012150.1|organism=Theobroma cacao|type=polypeptide|length=411bp
MPFDSEDRHSAYGIPMADCEQLDASNATNVHACRDTKQYDFSLVRNSKPL
YVPNSTNVRDIHACIEPKQGHVSMVDKDCKPMDVSIATNVFACSDVKESS
PSMVVADEQYGVDNYQGVLKDDEGDEVPSSAKQASLSKVVWNEQCLNVDF
SDEECEEDLMEAYNSQVIVSEDLAVTDNKELRIASEKVKEVIHLFREIYL
KLSQESDGKQKQILPLLAASHLLKQQKWINMHKRLGPIPGVKVGDYFSWR
AELNIIGLHRQHMCGIDYMELDGRILATSIVDSGRYDNVVESNDEQEFPN
VLIYSGQGENLKFRSRKLVNDQKLEGGNLALKNSAETKTPIRVIRKFCFK
GASSKIVDCKYVYDGLYFVDGYREEKASSRKLVFKFVLKRFPGQPKLWAK
IGSERTCLYE*
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