Tc03v2_t012010.1

Overview
NameTc03v2_t012010.1
Unique NameTc03v2_t012010.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length693
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 5 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productpolyadenylate-binding protein 1
NotePolyadenylate-binding protein 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18605250
GenbankXM_007038158.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g012010Tc03v2_g012010Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p012010.1Tc03v2_p012010.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto164940auto164940Theobroma cacaoexon
exon-auto164941auto164941Theobroma cacaoexon
exon-auto164942auto164942Theobroma cacaoexon
exon-auto164943auto164943Theobroma cacaoexon
exon-auto164944auto164944Theobroma cacaoexon
exon-auto164945auto164945Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto164946auto164946Theobroma cacaoCDS
CDS-auto164947auto164947Theobroma cacaoCDS
CDS-auto164948auto164948Theobroma cacaoCDS
CDS-auto164949auto164949Theobroma cacaoCDS
CDS-auto164950auto164950Theobroma cacaoCDS
CDS-auto164951auto164951Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t012010.1 ID=Tc03v2_t012010.1|Name=Tc03v2_t012010.1|organism=Theobroma cacao|type=mRNA|length=693bp
ATGGAGCAACATGAGGAGCAAGAGCACGAGGTGTACGGAGGGGAGATCCC
CGACGAGGAAGGAGAGATGGACGCTGACGTGGACATGTCTGGTGGAGCTG
AAGATTACGAAGGCAACGAGCAAGACCTCGAACAGGATCCCAATTCCAAC
TCCAAGGACTTGGAGGACATGAAAAAGAGACTTAAGGAGATCGAGGAAGA
GGCCGGGGCTTTACGTGAAATGCAGGCTAAAGTCGAGAAGGAGATGGGCG
CTGTCCAAGATTCATCAAGTGCTTCTGCCACCCAAGCTGAAAAGGAGGAA
GTGGATTCTCGCTCGATTTATGTTGGTAATGTAGACTACGCATGTACACC
AGAAGAAGTTCAGCAGCATTTCCAATCCTGTGGAACAGTAAACAGAGTGA
CAATTTTGACTGACAAGTTTGGTCAGCCTAAAGGATTTGCCTATGTTGAA
TTTGTTGAAGTTGATGCTGTTCAAAACGCTCTACTATTAAATGAATCAGA
ATTGCATGGTCGACAGTTGAAGGTCTCTGCAAAACGAACAAATATTCCTG
GAATGAAACAGTATCGAGGAAGGCGACCCAACCCATATTTCCGCTCCCGA
AGGCCTTTCATGCCTGGTCCTGCTTTTTATCCTCCATATGGCTATGGGAG
GGTTCCAAGGTTCAGGCGGCCCATGAGATACAGGCCATATTAA
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protein sequence of Tc03v2_p012010.1

>Tc03v2_p012010.1 ID=Tc03v2_p012010.1|Name=Tc03v2_p012010.1|organism=Theobroma cacao|type=polypeptide|length=231bp
MEQHEEQEHEVYGGEIPDEEGEMDADVDMSGGAEDYEGNEQDLEQDPNSN
SKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSASATQAEKEE
VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVE
FVEVDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNPYFRSR
RPFMPGPAFYPPYGYGRVPRFRRPMRYRPY*
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