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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns |
Comment | The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon |
Product | ADP-ribosylation factor GTPase-activating protein AGD1 |
Note | ADP-ribosylation factor GTPase-activating protein AGD1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc03v2_t011480.1 ID=Tc03v2_t011480.1|Name=Tc03v2_t011480.1|organism=Theobroma cacao|type=mRNA|length=2490bp ATGCATTTCTCCAAACTCGACGATACGCCGATGTTTCGGCAAGAGATACA GTGCTTGGAAGAGAACGCCGAGTTATTGCGAGGAAGATGTTTAAAATTTT ACAAAGGATGTCGAAAATACATAGAAGGGCTTGGAGAGGGTTATGATGGC GACATTGCTTTTGTAAATGCCCTTGAAACTTTTGGAGGGGGGCATAATGA TCCTATCTGTGTTGCTTTTGGAGGCCCAGTCATGACAAAATTCACCATTG CTTTGAGAGAAATTGGCACATACAAGGAAGTTCTTCGCTCACAGATAGAG CACATGCTAAATGAAAGGTTGCTTCAGTTTGTCAATGTTGATCTGCAAGA TGTCAAGGATGCTCGGAAACGTTTTGACAAGGCTTCACTTATATATGATC AGGCAAGGGAGAAGTTTCTGTCTTTAAGGAAAAGCACTAGGATGGATGTA GCTGCGGCCATTGAGGAGGAACTACATACTGCAAGAACCTCATTTGAGCA AGCCCGCTTCAATCTGGTTAGTGCTCTTTCAAAATTTGAAGCCAAAAAAA GGTTTGAATTTTTGGAGGCTGTTAGTGGGACGATGGATGCTCACCTTCGT TTCTTCAAACAGGGATATGAACTCTTACATCAGATGGAACCTTTTATAAA CCAGGTCTTGGCTTATGCACAACAGTCAAGGGAATGTTCTAACTATGAAC AGGCATCTCTAAGTGAAAGGATGCAGGAACATATCAGGCAGATTGATCTC AAGAGTAAGCAGTCCTGCTATGTTTGTCCTGCCACAGCGGATGGTATGCG ACCTTTTGCAAGGGGTTCCCAGAAAGTTATTGAGGCAGTTATGCAATCTG CTGAAAAGGGAAAGGTTCAAACCATACGACAAGGTTATCTTTCAAAACGT TCCTCAAACTTGAGGGGTGACTGGAAGAGAAGGTTTTTTGTTCTTGATAG TCAAGGGATGTTGTACTACTATCGTAAACCATTTGCCTGGTCTTCTGCAG GTGGAAGTCAGTCTGCTATACAAAGGAGTGGTCCCTCTGAAAGTGGTCCT GGGCTGCTAAGTCGATGGCTTTCTTCTCACTACCATGGTGGCGTACATGA TGAAAAATCTGTTGCACGTCACACTGTAAACTTGCTGACAGCAACAATTA AGGTTGACGCAGATCAGTCAGATTTAAGGTTTTGTTTCAGAATCATCTCA CCAACAAAAATCTATACATTGCAGGCAGAGAATGCACTGGACCAAAGGGA TTGGATTGAAAAAATAACTGGAGTAATTGCTTCATTATTGAGTTTCCAAA CACCTGAGAAGTGCCTCTCTGCTTACAACATGGGAACTGCTGATAATTGC TCTGCCAGTGATTGTAGTTCACTAGTAGATTCCTCTGATGCTTATCAGAC AGCAGTTGGAGAACATACATCTCAGAATCTCTCCTCTGGAAGTCATTTAG ATATATCGAGAAGTTTGCAGCATCAAGGGTATTGCATAAAGAGTGAAAAG CCAATTGATATCTTAAGAAGGGTAGCTGGGAATGATAAATGTGTCGACTG TGGTGCACCTGAGCCAGACTGGGCATCTTTAAACCTCGGTGTCCTTATAT GCATTGAATGTTCTGGAGTTCATCGTAATCTTGGTGTACATATATCAAAG ATAAGATCACTGACACTTGACGTTAAAGTGTGGGAACCATCTGTCCTGGC TTTGTTTCAATCACTGGGCAATATCTATGCAAACTCAATCTGGGAGGAGT TGTTGCACTCAAGAAGTACAAGAACTGCCATGCCTGTAGGTTCTTCAAAG TCTGATGTACATAAACAGCTTCTCACAATGAAACCTAGTTACAATGATCC GATTTCAGTGAAGGAGTTGTTCATTCATGCAAAGTATGCAGAGAAAGCTT TTGTTTCTAAGAAACAGGACAATCAGCATCTCCTTGCAGTGGCAGAAGAG GTGTGGGAAAGTGTCCGTGCTAATGACCAAAAAGCTGTATACCGCCACAT TGTTTGCTCTGGAGCAGATGTCAATGCTATCCATGGGCAAGCATCATATT GTACATCCTTAACTCTTACCAAAAGTAATTTATGGGAAGACCAAGAAATC CCTCATCACAACTTTGATTGCTTTGCAGGTGACTCTCTGGATCAGCCCTC CAGATATTTGAACTCATTAAACAAAAGTGAAGATCAGATTGAAAAGGAGT GTTCTGATGGTTGTTCTCTACTTCATCTCGCCTGCCTGACCACTGACATT GGCATGGTGGAGCTTCTCCTTCAGTATGGTGCAAACATAAATGCTTCTGA TTCAAGAGGTCGGACACCGCTTCATCTTTGTGTTGTTAGCGGGAAATCTT CAATAGCAAAATTGCTGCTTACAAGGGGAGCAGACCCGCATGCTGTAGAT GGAGAAGGTAACACTGCGCTTCAGCTTGCATCAGCATCAGGCATTGATGA TAATGAGGTCTTGGCGCTCTTAACAGACACACACAGATAG back to topprotein sequence of Tc03v2_p011480.1 >Tc03v2_p011480.1 ID=Tc03v2_p011480.1|Name=Tc03v2_p011480.1|organism=Theobroma cacao|type=polypeptide|length=830bp
MHFSKLDDTPMFRQEIQCLEENAELLRGRCLKFYKGCRKYIEGLGEGYDG DIAFVNALETFGGGHNDPICVAFGGPVMTKFTIALREIGTYKEVLRSQIE HMLNERLLQFVNVDLQDVKDARKRFDKASLIYDQAREKFLSLRKSTRMDV AAAIEEELHTARTSFEQARFNLVSALSKFEAKKRFEFLEAVSGTMDAHLR FFKQGYELLHQMEPFINQVLAYAQQSRECSNYEQASLSERMQEHIRQIDL KSKQSCYVCPATADGMRPFARGSQKVIEAVMQSAEKGKVQTIRQGYLSKR SSNLRGDWKRRFFVLDSQGMLYYYRKPFAWSSAGGSQSAIQRSGPSESGP GLLSRWLSSHYHGGVHDEKSVARHTVNLLTATIKVDADQSDLRFCFRIIS PTKIYTLQAENALDQRDWIEKITGVIASLLSFQTPEKCLSAYNMGTADNC SASDCSSLVDSSDAYQTAVGEHTSQNLSSGSHLDISRSLQHQGYCIKSEK PIDILRRVAGNDKCVDCGAPEPDWASLNLGVLICIECSGVHRNLGVHISK IRSLTLDVKVWEPSVLALFQSLGNIYANSIWEELLHSRSTRTAMPVGSSK SDVHKQLLTMKPSYNDPISVKELFIHAKYAEKAFVSKKQDNQHLLAVAEE VWESVRANDQKAVYRHIVCSGADVNAIHGQASYCTSLTLTKSNLWEDQEI PHHNFDCFAGDSLDQPSRYLNSLNKSEDQIEKECSDGCSLLHLACLTTDI GMVELLLQYGANINASDSRGRTPLHLCVVSGKSSIAKLLLTRGADPHAVD GEGNTALQLASASGIDDNEVLALLTDTHR* back to top
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