|
|
Properties
| Property Name | Value |
|---|
| Model evidence | Supporting evidence includes similarity to: 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns |
| Product | quinolinate synthase, chloroplastic, transcript variant X1 |
| Note | Quinolinate synthase, chloroplastic |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc03v2_t009500.2 ID=Tc03v2_t009500.2|Name=Tc03v2_t009500.2|organism=Theobroma cacao|type=mRNA|length=2193bp
ATGGAATTCTCTGCTACCATCGCCATGAAAGCTTCTTCTTCGTCTTCATC
TTTTTTCTCTATCTCCCAAACCCAGATTTCTAACCCAAAATCACTTCTTT
TCAACTTCCATAAAACACCCAGAACCAATAAAAAATCCTTATATAAGTCT
CTCAAAAGTATCCAATCTCCACCTCCTGGTTCACCTCCTTCAAAGCCCAT
TTCTTTTGCCTGCTCTGCTGTCACCCTGTCTCCCTCACAGACCGCTCATC
TCCCTCCACGTAAACTCTCCAGCCTTCTCTCCGAATTCCAATCCCTTTTA
GAGCCTCTCGACCGTGTCAAGCGTCTCCTTCACTATGCTTCTCTCCTCCC
TACTCTCCCAGCTTCTTCTCGCACCGACTCGAACCGGGTCATGGGCTGCA
CGGCCCGAGTTTGGCTCGAAGTCCAGATGGACTCTGAGGGGAAGATGAGA
TTTTGGGCCGACAGCGATTCGGAGATCACGAAAGGATTCTGCGCCTGTTT
GGTTTCGGTTCTTGATGGGGCGGCGCCAGAGGAAGTGCTGGGATTGAAAA
CAGAGGACTTGGCGGCGCTTAACGTGGGACTGCCTGGTGGGGCAAGGTCT
CGTGTGAACACGTGGCATAATGTGTTGGTTAGTATGCAGAAGCGAACCAG
GTCCTTGGTTTCTGAAAAGGAAGGGAAGGCCCCTTTTGAACCGTTTCCTT
CGTTGGTGATCACGGCTGAGGGTGTTCAGCCAAAAGGAAGCTATGCCGAG
GCTCAGGCAAGATATTTGTTCCCTGATGAGTTAAAGGTGAAAGAACTTGT
CAATGTTCTGAAAGAGAAGAAAATTGGTGTCGTTGCTCACTTTTACATGG
ATCCTGAAGTGCAAGGCATCTTAACTGCTGCTCAGAAGGATTGGCCTTAC
ATCCATATATCTGACTCGTTAGTCATGGCAGATACAGCTGTCAAGATGGC
AAAAGCTGGATGTAAATTCATAACCGTTTTGGGTGTAGATTTTATGTCAG
AAAATGTGCGTGCGATTCTTGATCAAGCTGGCTTTGGAGAGGTTGGTGTC
TACAGGATGTCAAATGAACGCATAGGTTGTTCTTTGGCTGATGCTGCTGC
TACGCCTGATTATATGAACTATCTCAAGGCAGCTTCTAACTCACTTCCTT
CTTTGCACGTTATTTACATTAATACTTCACTAGAAACAAAAGCTTATGCT
CATGAGCTTGTACCTACAATCACTTGTACTTCTTCAAATGTTGTGCAAAC
CATTCTGCAGGCTTTTACTCAAATCCCAGACTTAAACATATGGTATGGGC
CCGATTCCTATATGGGTGCTAATATAAAAGAGTTGTTCGAGCAGATGACT
TTGATGTCTGATGAGGAAATTGCTGAATTATACCCAGAACATAATAGAGA
CTCAATTAAATCACTGCTACCTCACCTGCACTATTATGAGGATGGAACAT
GTATTGTTCATCACCTTTTTGGACGTGAGGTTGTAGAGAAGATAAATGAA
ATGTACTGTGATGCATTTCTAACAGCACATTTTGAGGTTCCTGGAGAAAT
GTTCTCTTTGGCAATGGAAGCCAAGAGAAGAGGAATGGGTGTTGTAGGCT
CCACTCAAAACATATTGGATTTTATAAAACAAAGGGTTCAGGAGGCATTA
GATAGAAATGTTGATGACCACCTCCAATTTGTCTTGGGTACAGAATCGGG
AATGGTGACTGCAATTGTTGCAGCTGTTCGCAGTTTGTTAGATTCTTCAA
AGTCAACTTCTACAGCAAAAATCAATGTTGAAATTGTCTTTCCAGTCTCA
TCTGATTCAATGACAAAAACATCTACGAGCTCATCCCCTGTTCTTGAATC
AGTTAAAATGGGTGATGTTATACTCCCTGTTGTACCTGGAGTTGCAAGTG
GGGAGGGATGTTCTATTCATGGCGGTTGTGCATCTTGTCCGTACATGAAG
ATGAATTCTCTTACCTCACTCCTAAAAATTTGCCACCAATTGCCTGATGA
GAGAGATATCCTTGAGGCATATGAAGCTGAACGGTTCAAGTTGCAAACCC
CTCAAGGAAAAAATATTGCAGATGTTGGATGTGAGCCTATATTGCATATG
AGACACTTTCAGGCCAAGAAAGAATTGCCAGAGAAGCTTGTCTACCAGGT
TCTTGGTCCACATGGTAATGGAAAGTCACTGTCTATAAGCTGA back to topprotein sequence of Tc03v2_p009500.2 >Tc03v2_p009500.2 ID=Tc03v2_p009500.2|Name=Tc03v2_p009500.2|organism=Theobroma cacao|type=polypeptide|length=731bp
MEFSATIAMKASSSSSSFFSISQTQISNPKSLLFNFHKTPRTNKKSLYKS
LKSIQSPPPGSPPSKPISFACSAVTLSPSQTAHLPPRKLSSLLSEFQSLL
EPLDRVKRLLHYASLLPTLPASSRTDSNRVMGCTARVWLEVQMDSEGKMR
FWADSDSEITKGFCACLVSVLDGAAPEEVLGLKTEDLAALNVGLPGGARS
RVNTWHNVLVSMQKRTRSLVSEKEGKAPFEPFPSLVITAEGVQPKGSYAE
AQARYLFPDELKVKELVNVLKEKKIGVVAHFYMDPEVQGILTAAQKDWPY
IHISDSLVMADTAVKMAKAGCKFITVLGVDFMSENVRAILDQAGFGEVGV
YRMSNERIGCSLADAAATPDYMNYLKAASNSLPSLHVIYINTSLETKAYA
HELVPTITCTSSNVVQTILQAFTQIPDLNIWYGPDSYMGANIKELFEQMT
LMSDEEIAELYPEHNRDSIKSLLPHLHYYEDGTCIVHHLFGREVVEKINE
MYCDAFLTAHFEVPGEMFSLAMEAKRRGMGVVGSTQNILDFIKQRVQEAL
DRNVDDHLQFVLGTESGMVTAIVAAVRSLLDSSKSTSTAKINVEIVFPVS
SDSMTKTSTSSSPVLESVKMGDVILPVVPGVASGEGCSIHGGCASCPYMK
MNSLTSLLKICHQLPDERDILEAYEAERFKLQTPQGKNIADVGCEPILHM
RHFQAKKELPEKLVYQVLGPHGNGKSLSIS* back to top
|