Tc03v2_t009060.3

Overview
NameTc03v2_t009060.3
Unique NameTc03v2_t009060.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2034
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productdisease resistance protein At4g27190, transcript variant X3
NoteUncharacterized protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18604925
GenbankXM_018116961.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g009060Tc03v2_g009060Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p009060.3Tc03v2_p009060.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto158279auto158279Theobroma cacaoexon
exon-auto158280auto158280Theobroma cacaoexon
exon-auto158281auto158281Theobroma cacaoexon
exon-auto158282auto158282Theobroma cacaoexon
exon-auto158283auto158283Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto158284auto158284Theobroma cacaoCDS
CDS-auto158285auto158285Theobroma cacaoCDS
CDS-auto158286auto158286Theobroma cacaoCDS
CDS-auto158287auto158287Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t009060.3 ID=Tc03v2_t009060.3|Name=Tc03v2_t009060.3|organism=Theobroma cacao|type=mRNA|length=2034bp
ATGCAGCAATCTGTTCTCAAGGCAAGTGGCTCAGGATTGACCCAGCTACG
CGAGGAAGAAGAATGGGCAGGCAAAGGGGTGCTTTTCATGAATGATAATA
AAGCGTCTGAGCTACATCCATCTCCAAATTGCCCTTCACCGATTGCGTTG
TATTTGCAAGGGAATTATGAGCTGACAGCTATTCCTCCCTTCTTCTTCCG
GCGCATGGCCCTTCTCCAAGTGTTAGATTTGTCCCACACTAGCATCAAAT
GCTTGCCAAAGTCTCTTCCCAGGTTGGTTGCACTAAAGAAACTCTTGTTA
CGGCGTTGTCAACTCTTCATGGAGCTATCACCGCAGGTTGCGAAACTCAG
TAATCTGCAGGAGCTTGATCTTGATGAAACTCAGATCATGGATTTGCCTA
GGGAGATTGGAAAGCTACTGAATTTAAGACATTTGAGAGTATCATTTTAT
CTGATCTGTGGCAAAAAGAAGTCGAAATCAAACATTCTGATTCACCCTGA
GACAATATCAGATCTCTCCCTACTTACTGAATTAAGCATTGATGTAAATC
CGACGGACAAGAGGTGGGATGATTCTGTGGAAGCAGTTGTGAAGGAAGTA
TGCAACTCAGAAACATTGACGACTCTTAGCTTGTACCTGCCGAAATTCCA
ACTTTTAGATAATATATCATCGTTATATCCTTCATTGTCAGGCTTTAGAT
TTACTGTTGGTCATCATAAAAGGAGAATCATATCTCGTGTACCTCATGAA
GTTGAAGCAGAATTCAGAAATTGGGACAAATGCTTGAAGTTTGTGAATGG
TGAAAACATCCCAATTGAAATAAAAGATGTACTAAAATATTCTACTTCAT
TTTTCTTGGACCACCATGCAACCGCTATGAATCTATCTGAATTTGGGATT
GAGAATATGAAGAGGCTAAAATTTTGCTTGTTGGTAGACTGTAATAAGAT
GGAAACCATTATTGATGGCGAGAGGCGTTATGAAGGAAATGAAGATGATC
TATCGGAATCTGACCCAAGTCCTGTGGAAAATGTGCTTGAGTCCCTGGAA
TATTTGATCATTTATTACATGGAGAATTTAGAGAGTATTTGGAGAGGACC
AAATCGCTATGGATGTATGTCTAAGCTAAAATTCCTAGCACTGCATACAT
GCCCCCAGCTGATTAATATTTTCTCTCATACTTTGCTTGGAAATTTTGTC
AACTTGGAAGAGTTTATTCTTGAGGACTGCCCTCTAGTCACCAGCCTGGT
AAGCCATGCATCTGTCAAGCCAATGGTGTCAGATAAATTTCTCCCTAGTT
TGAAAAGATTGCTGCTTCTTTACCTTCCTGAACTGGTCAGCATTTCTAAT
GGACTACTAATTGCACCAAAATTAGAAACCATAGGCTTTTATAATTGCCC
AAAGCTTAAAAGCATATCAAAAATGGAATTGTCAAGCAAAACTTTGAAGA
TAATCAAAGGAGAACTTCAGTGGTGGGAAGATATGAAGTGGAATGAAGCA
GAGTGGGGAAACCGGCCAGATTATCTAATGCGTATCTTTTCCCCTATCGA
CAAAGAGAAAGATGTGATGAACCAATTGGCAGAAGATAGAGATCTATTTG
AAGTCACAATGCAAAATGAAGGCCAACAACTAGGCAATTGCCGTTCATTA
CTGTCAGATTACACGGAGGAGAGAATAACTGGAGCAGATGTGACAAAGTC
AATTTCTTCGGTATGCATACTTCCATCCACTCCATGGACCGAGGCACCAA
AACAAGCATGGAGCTTTTCACCAGATGAGAACAAGAGGCTAGAAGATGAT
TATTTTGATCTGGCTTCAGAAACCAGTGAAGCAGACGATATTGTAGATGA
ACCTAAGGCCAAAAGATGGAACTGTACTGAGAATGAAAACAAGGGTGTCA
TACGTTTTGCAAGCAAAGTTGCGACAGGGGATAGAACTGAATTTCAAGTA
AAAAGAAACGTTGATATACTTGATGATGGTTATAAATGGAGGAACCATAG
AACGAAGTTAAAGGGATATCCCTACTCAAGTTGA
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protein sequence of Tc03v2_p009060.3

>Tc03v2_p009060.3 ID=Tc03v2_p009060.3|Name=Tc03v2_p009060.3|organism=Theobroma cacao|type=polypeptide|length=678bp
MQQSVLKASGSGLTQLREEEEWAGKGVLFMNDNKASELHPSPNCPSPIAL
YLQGNYELTAIPPFFFRRMALLQVLDLSHTSIKCLPKSLPRLVALKKLLL
RRCQLFMELSPQVAKLSNLQELDLDETQIMDLPREIGKLLNLRHLRVSFY
LICGKKKSKSNILIHPETISDLSLLTELSIDVNPTDKRWDDSVEAVVKEV
CNSETLTTLSLYLPKFQLLDNISSLYPSLSGFRFTVGHHKRRIISRVPHE
VEAEFRNWDKCLKFVNGENIPIEIKDVLKYSTSFFLDHHATAMNLSEFGI
ENMKRLKFCLLVDCNKMETIIDGERRYEGNEDDLSESDPSPVENVLESLE
YLIIYYMENLESIWRGPNRYGCMSKLKFLALHTCPQLINIFSHTLLGNFV
NLEEFILEDCPLVTSLVSHASVKPMVSDKFLPSLKRLLLLYLPELVSISN
GLLIAPKLETIGFYNCPKLKSISKMELSSKTLKIIKGELQWWEDMKWNEA
EWGNRPDYLMRIFSPIDKEKDVMNQLAEDRDLFEVTMQNEGQQLGNCRSL
LSDYTEERITGADVTKSISSVCILPSTPWTEAPKQAWSFSPDENKRLEDD
YFDLASETSEADDIVDEPKAKRWNCTENENKGVIRFASKVATGDRTEFQV
KRNVDILDDGYKWRNHRTKLKGYPYSS*
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