Tc03v2_t009060.1

Overview
NameTc03v2_t009060.1
Unique NameTc03v2_t009060.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2088
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Productdisease resistance protein At4g27190, transcript variant X1
NoteUncharacterized protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18604925
GenbankXM_018116960.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g009060Tc03v2_g009060Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p009060.1Tc03v2_p009060.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto158253auto158253Theobroma cacaoexon
exon-auto158254auto158254Theobroma cacaoexon
exon-auto158255auto158255Theobroma cacaoexon
exon-auto158256auto158256Theobroma cacaoexon
exon-auto158257auto158257Theobroma cacaoexon
exon-auto158258auto158258Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto158259auto158259Theobroma cacaoCDS
CDS-auto158260auto158260Theobroma cacaoCDS
CDS-auto158261auto158261Theobroma cacaoCDS
CDS-auto158262auto158262Theobroma cacaoCDS
CDS-auto158263auto158263Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t009060.1 ID=Tc03v2_t009060.1|Name=Tc03v2_t009060.1|organism=Theobroma cacao|type=mRNA|length=2088bp
ATGCAGCAATCTGTTCTCAAGGCAAGTGGCTCAGGATTGACCCAGCTACG
CGAGGAAGAAGAATGGGCAGGCAAAGGGGTGCTTTTCATGAATGATAATA
AAGCGTCTGAGCTACATCCATCTCCAAATTGCCCTTCACCGATTGCGTTG
TATTTGCAAGGGAATTATGAGCTGACAGCTATTCCTCCCTTCTTCTTCCG
GCGCATGGCCCTTCTCCAAGTGTTAGATTTGTCCCACACTAGCATCAAAT
GCTTGCCAAAGTCTCTTCCCAGGTTGGTTGCACTAAAGAAACTCTTGTTA
CGGCGTTGTCAACTCTTCATGGAGCTATCACCGCAGGTTGCGAAACTCAG
TAATCTGCAGGAGCTTGATCTTGATGAAACTCAGATCATGGATTTGCCTA
GGGAGATTGGAAAGCTACTGAATTTAAGACATTTGAGAGTATCATTTTAT
CTGATCTGTGGCAAAAAGAAGTCGAAATCAAACATTCTGATTCACCCTGA
GACAATATCAGATCTCTCCCTACTTACTGAATTAAGCATTGATGTAAATC
CGACGGACAAGAGGTGGGATGATTCTGTGGAAGCAGTTGTGAAGGAAGTA
TGCAACTCAGAAACATTGACGACTCTTAGCTTGTACCTGCCGAAATTCCA
ACTTTTAGATAATATATCATCGTTATATCCTTCATTGTCAGGCTTTAGAT
TTACTGTTGGTCATCATAAAAGGAGAATCATATCTCGTGTACCTCATGAA
GTTGAAGCAGAATTCAGAAATTGGGACAAATGCTTGAAGTTTGTGAATGG
TGAAAACATCCCAATTGAAATAAAAGATGTACTAAAATATTCTACTTCAT
TTTTCTTGGACCACCATGCAACCGCTATGAATCTATCTGAATTTGGGATT
GAGAATATGAAGAGGCTAAAATTTTGCTTGTTGGTAGACTGTAATAAGAT
GGAAACCATTATTGATGGCGAGAGGCGTTATGAAGGAAATGAAGATGATC
TATCGGAATCTGACCCAAGTCCTGTGGAAAATGTGCTTGAGTCCCTGGAA
TATTTGATCATTTATTACATGGAGAATTTAGAGAGTATTTGGAGAGGACC
AAATCGCTATGGATGTATGTCTAAGCTAAAATTCCTAGCACTGCATACAT
GCCCCCAGCTGATTAATATTTTCTCTCATACTTTGCTTGGAAATTTTGTC
AACTTGGAAGAGTTTATTCTTGAGGACTGCCCTCTAGTCACCAGCCTGGT
AAGCCATGCATCTGTCAAGCCAATGGTGTCAGATAAATTTCTCCCTAGTT
TGAAAAGATTGCTGCTTCTTTACCTTCCTGAACTGGTCAGCATTTCTAAT
GGACTACTAATTGCACCAAAATTAGAAACCATAGGCTTTTATAATTGCCC
AAAGCTTAAAAGCATATCAAAAATGGAATTGTCAAGCAAAACTTTGAAGA
TAATCAAAGGAGAACTTCAGTGGTGGGAAGATATGAAGTGGAATGAAGCA
GAGTGGGGAAACCGGCCAGATTATCTAATGCGTATCTTTTCCCCTATCGA
CAAAGAGAAAGATGTGATGAACCAATTGGCAGAAGATAGAGATCTATTTG
AAGTCACAATGCAAAATGAAGGCCAACAACTAGATGATGAAAAGTTGATT
GAAGTTTCAACACAAGATCATGGAGGCCGTTGGTCAGGCAATTGCCGTTC
ATTACTGTCAGATTACACGGAGGAGAGAATAACTGGAGCAGATGTGACAA
AGTCAATTTCTTCGGTATGCATACTTCCATCCACTCCATGGACCGAGGCA
CCAAAACAAGCATGGAGCTTTTCACCAGATGAGAACAAGAGGCTAGAAGA
TGATTATTTTGATCTGGCTTCAGAAACCAGTGAAGCAGACGATATTGTAG
ATGAACCTAAGGCCAAAAGATGGAACTGTACTGAGAATGAAAACAAGGGT
GTCATACGTTTTGCAAGCAAAGTTGCGACAGGGGATAGAACTGAATTTCA
AGTAAAAAGAAACGTTGATATACTTGATGATGGTTATAAATGGAGGAACC
ATAGAACGAAGTTAAAGGGATATCCCTACTCAAGTTGA
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protein sequence of Tc03v2_p009060.1

>Tc03v2_p009060.1 ID=Tc03v2_p009060.1|Name=Tc03v2_p009060.1|organism=Theobroma cacao|type=polypeptide|length=696bp
MQQSVLKASGSGLTQLREEEEWAGKGVLFMNDNKASELHPSPNCPSPIAL
YLQGNYELTAIPPFFFRRMALLQVLDLSHTSIKCLPKSLPRLVALKKLLL
RRCQLFMELSPQVAKLSNLQELDLDETQIMDLPREIGKLLNLRHLRVSFY
LICGKKKSKSNILIHPETISDLSLLTELSIDVNPTDKRWDDSVEAVVKEV
CNSETLTTLSLYLPKFQLLDNISSLYPSLSGFRFTVGHHKRRIISRVPHE
VEAEFRNWDKCLKFVNGENIPIEIKDVLKYSTSFFLDHHATAMNLSEFGI
ENMKRLKFCLLVDCNKMETIIDGERRYEGNEDDLSESDPSPVENVLESLE
YLIIYYMENLESIWRGPNRYGCMSKLKFLALHTCPQLINIFSHTLLGNFV
NLEEFILEDCPLVTSLVSHASVKPMVSDKFLPSLKRLLLLYLPELVSISN
GLLIAPKLETIGFYNCPKLKSISKMELSSKTLKIIKGELQWWEDMKWNEA
EWGNRPDYLMRIFSPIDKEKDVMNQLAEDRDLFEVTMQNEGQQLDDEKLI
EVSTQDHGGRWSGNCRSLLSDYTEERITGADVTKSISSVCILPSTPWTEA
PKQAWSFSPDENKRLEDDYFDLASETSEADDIVDEPKAKRWNCTENENKG
VIRFASKVATGDRTEFQVKRNVDILDDGYKWRNHRTKLKGYPYSS*
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