Tc03v2_t009050.1

Overview
NameTc03v2_t009050.1
Unique NameTc03v2_t009050.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2961
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Productdisease resistance protein RPS2
NotePutative Disease resistance protein At4g27190
Cross References
External references for this mRNA
DatabaseAccession
GeneID18604924
GenbankXM_018118551.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g009050Tc03v2_g009050Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p009050.1Tc03v2_p009050.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto158246auto158246Theobroma cacaoexon
exon-auto158247auto158247Theobroma cacaoexon
exon-auto158248auto158248Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto158249auto158249Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t009050.1 ID=Tc03v2_t009050.1|Name=Tc03v2_t009050.1|organism=Theobroma cacao|type=mRNA|length=2961bp
ATGGCTGACAACATATTAGCTTCTTGTCTCGCGGGAGCTGTGAGCCAAGC
TGGGGCAGATTTAACTAATTATGCTAAAAGCAAAGTCAGTTTATCACAGA
GTATGGAGAAAAACTATGAAATGTTAAGAAATGAAGTAGCAAGACTCCAG
GCTTTGAGGGATGATTATGAAAGGGAAGTCAAGAAACATAAAATGAAGAC
AACTACTAGCAGCTATGATGTATGGCGACGCTGTGTTAACAAGACGCTTG
AAAATGCAAAAGAATTAGAAGATCGATTTGAAGAAGATAGAAGGCCTTCA
TCTAGATACATTCATGTGAAGCGAAGATCAAATTATAGTGGAAAATTGGT
AAAAATGTATGAAGAAATTCAAAAGCTTGTGGAAGAGGGGAAATTTCTGG
GAGGTATTTTGGTTGATAAACCTGTAGATCCTGTCTTAAAGGTGCATGCA
CCTGAGATCAAAGGATTTCCTAGCCTTCAGAGGCCGCTAGAACAGGTATT
GGAGCTGTTAAGAAATGACAAATTGAAAGGTATTGGGATTTGCGGCACGT
TAGGGGTTGGGAAAACAACAATAATGCAAAACTTGAATAACCATGATGAA
GTATCTAAAATGTTTGATATTGTCATTTGGGAAAATGTCTCTAGTGAGAG
GACCGAGGAAAAATTGCAAGAGGATATCGCACGGCGACTTAAACTAAAAA
TGGAAGGCGTTGTCCATCCTGAGGACGTTGCCAGAACAATATCAGAAGAG
TTGAATAACAAGAAGTATTTGCTGCTTTTGGATGACGTCATGGACTCAGT
TGATTTGGAAGATATTGGAGTCCCTGACAACAAAAATGGCAGCAAAGTGG
TATTGACAACTGAATTCCGTCATGTTTGTTCGTCAATGGCAGACAGATTG
ATTGAGGTGCACCCATTATCATCAAATGAGGCTTGGAAGATGTTTCAGCA
GATGGTCAGTGATGTCGTAGATCTGCCTGATATTGAACCAGTTGCTCAGC
TGGTAGCTAAGGAGTGTGCTCGACTCCCACTTCTGATCAAGACAGTGGCA
GGTGCTTTCAAGTTGAAAGATAGTGTGCCAGAATGGAGGAAAGGGCTCAA
AGACTTACGGAAATGGCCAGAAATTGAGATTCCAGGCTTAACTGAATTGC
ATTCATTCTTGAAGTTCTGTTATGATCAACTAAAGGATGATCAGAAAAGG
AAATGCTTCTTGTATGGTGCATTGTATCCAGCAGAGAGTAAGATTTATAC
AGATTATTTACTGGAGTGTTGGACTGCTGAAGGACTCGTTGGCAATACTA
ATGAGAAGAGGAGATTTCAAGATGCACGTGATGAGGGTTATGACACATTG
AAGTATCTAACTAATGTGTCATTACTAGAGAAAGGTGAAAGGATGATTTA
TGTTCAAATGAACAATAGTATCCGACAGGTTGCTTTGTATATTTCTTCAC
AAGATCCTGATTGTAAATTTTTGACTGGAATGACTGAAAATTCACCTGAT
TGCTTGGAAGAAAATGATTGGCAACAAGCAAAGAGGATCTCCATGATTGA
CAAAAAGTTGAGAGACTTGCCAGAAAGCCCCAACTGTAACATGCTTTTGT
CACTATTACTACAGAGGAATTCGAATTTGTCAGGAATACCCCAATCTTTT
TTTGAAAATATGAAGAAACTTTTGGTTTTGGACCTATATGGAACTGGGAT
TGAATCACTGCCATCATCTTTAGCAAAGTTGACAGGTCTTAAGGGGCTTT
ACTTAAATAATTGCATCAATGTAACGGAGTTGCCTCCCGAAATTGGAGAA
CTTAATTGTCTCGAGGTGCTTGACATTCGAGGCTGCAGGATAAGCTTCAT
TCCATTTCATATTCAAAAACTGATTAACTTAAGGTGCTTGCGAATCTCAT
ACTACAGATCTAGCAACTTAAATCACTGCCAAGATATGGACATTGACTGT
AATGTGATTCCATTGCTGGCCAGACTGGAAGAATTAATGATTGATGTGGG
TTCTTATGATCATTGGTGCAATGAGGTCGTAGAAGTAATGAGGCAGGTGG
CTACCTTGGAGAATTTAACTACTCTGAGAATCTGCTTTCCTAGATCAGAG
GTCCTCAAGACTTTTATGCAGCACAGTCCATCTTGGAAAGATCGCCAACA
ACTGACTTCTTTTCGATTCTTTGTTGGTTGCCAAAACAGGAAACGTCCTC
AAATTCTTGAGTGTTTTAAGTACAAAATCAATCGGTATTTGGGATATTGC
CATGGCAATTACAGTGATGACTCAACAATTTGTGATCTGCTTGCTGAAAC
TGATGCATTGGAGTTGGTTGAACACAAAGATATAAAGAGTCTGACAGATT
TTGGGAATGTTGCTAGCTTTAACAGGATTCGTGGTTGTCTAATTGAAAGG
TGCAACAAAATGACAACTATTACAGATAACAACAGGACAGAAGGTAGAGA
CATCCTACCAAATTTAGAGCAATTGCATTTGGTAAATTTGCGGAGTCTGC
AAACCATTTTGGAGGGCTCCTTGTCAACCAAAAGTCTTTCCAAATTACAC
ACGGTGGTGGTGACGAGTTGCCCAATGTTGACAAAAGTTTTCTCTCTCAG
GGTGATTCAACAACTCTCTGTACTCCGCAAACTAGCAATTCAAAAGTGCG
CCAAGCTGGAAGTGCTAATTGAGAAGCCTGACAGTGCTGGACAAGTTTCA
CCTGCTTTTCCAAATCTAGAGACATTGATATTGATTGAGATGCCAAAACT
AAGGACTATATGTGTAGATAAGTCATTGGCATGGCCCTCCTTAAAAGAGC
TTCAGGTCTACATGTGCCCTGAATTGAAATCACTACCATTTGACAAAGAC
AATGCAGCATATCTGAAATCCATTGAAGCAGAACAAGTATGGTGGGAGGC
ACTGCATTGGCCACAGAATGAGGTCAAAGAACAGCTTCAATCAATGTGCA
ATCTGAGGTAA
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protein sequence of Tc03v2_p009050.1

>Tc03v2_p009050.1 ID=Tc03v2_p009050.1|Name=Tc03v2_p009050.1|organism=Theobroma cacao|type=polypeptide|length=987bp
MADNILASCLAGAVSQAGADLTNYAKSKVSLSQSMEKNYEMLRNEVARLQ
ALRDDYEREVKKHKMKTTTSSYDVWRRCVNKTLENAKELEDRFEEDRRPS
SRYIHVKRRSNYSGKLVKMYEEIQKLVEEGKFLGGILVDKPVDPVLKVHA
PEIKGFPSLQRPLEQVLELLRNDKLKGIGICGTLGVGKTTIMQNLNNHDE
VSKMFDIVIWENVSSERTEEKLQEDIARRLKLKMEGVVHPEDVARTISEE
LNNKKYLLLLDDVMDSVDLEDIGVPDNKNGSKVVLTTEFRHVCSSMADRL
IEVHPLSSNEAWKMFQQMVSDVVDLPDIEPVAQLVAKECARLPLLIKTVA
GAFKLKDSVPEWRKGLKDLRKWPEIEIPGLTELHSFLKFCYDQLKDDQKR
KCFLYGALYPAESKIYTDYLLECWTAEGLVGNTNEKRRFQDARDEGYDTL
KYLTNVSLLEKGERMIYVQMNNSIRQVALYISSQDPDCKFLTGMTENSPD
CLEENDWQQAKRISMIDKKLRDLPESPNCNMLLSLLLQRNSNLSGIPQSF
FENMKKLLVLDLYGTGIESLPSSLAKLTGLKGLYLNNCINVTELPPEIGE
LNCLEVLDIRGCRISFIPFHIQKLINLRCLRISYYRSSNLNHCQDMDIDC
NVIPLLARLEELMIDVGSYDHWCNEVVEVMRQVATLENLTTLRICFPRSE
VLKTFMQHSPSWKDRQQLTSFRFFVGCQNRKRPQILECFKYKINRYLGYC
HGNYSDDSTICDLLAETDALELVEHKDIKSLTDFGNVASFNRIRGCLIER
CNKMTTITDNNRTEGRDILPNLEQLHLVNLRSLQTILEGSLSTKSLSKLH
TVVVTSCPMLTKVFSLRVIQQLSVLRKLAIQKCAKLEVLIEKPDSAGQVS
PAFPNLETLILIEMPKLRTICVDKSLAWPSLKELQVYMCPELKSLPFDKD
NAAYLKSIEAEQVWWEALHWPQNEVKEQLQSMCNLR*
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