Tc03v2_t008060.1

Overview
NameTc03v2_t008060.1
Unique NameTc03v2_t008060.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1443
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 73 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
ProductUDP-glucose 6-dehydrogenase 1, transcript variant X3
NoteUDP-glucose 6-dehydrogenase 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18604792
GenbankXM_018117834.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g008060Tc03v2_g008060Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p008060.1Tc03v2_p008060.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto156195auto156195Theobroma cacaoexon
exon-auto156196auto156196Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto156197auto156197Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t008060.1 ID=Tc03v2_t008060.1|Name=Tc03v2_t008060.1|organism=Theobroma cacao|type=mRNA|length=1443bp
ATGGTGAAGATTTGTTGCATTGGAGCTGGATATGTTGGTGGTCCTACAAT
GGCAGTTATTGCACTGAAGTGCCCCTCCATTGAAGTGGCGGTTGTTGACA
TCTCTGTTTCTCGAATCTCGGCCTGGAATAGTGACCAGCTCCCTATCTAT
GAGCCAGGTCTTGATGAGGTGGTCAAGGAGTGCAGGGGAAAGAACCTCTT
CTTTAGCACTGACATTGAAAAGCATGTCTCTGAAGCAGACATAATCTTTG
TTTCTGTGAACACACCGACAAAAACCCGAGGCCTTGGGGCTGGCAAAGCT
GCAGACCTTACATATTGGGAGAGTGCAGCCAGGATGATTGCTGATGTATC
AAAATCCAACAAAATTGTTGTTGAGAAGTCAACCGTCCCAGTGAAAACAG
CTGAGGCAATTGAAAAAATCCTTACGCACAATAGCAAGGGCATCAAGTAC
CAAATTCTATCAAATCCAGAATTCCTTGCGGAGGGTACTGCAATTCAGGA
CCTATTTAAACCAGACAGGGTTCTCATTGGAGGCAGGGAAACCCCTGAAG
GCCAAAAGGCAATTCAAGCGCTGAAAGATGTTTATGCTCATTGGGTGCCT
GAGGACAGAATCATTACAACCAATCTCTGGTCAGCTGAGCTCTCAAAGCT
TGCAGCCAATGCTTTCTTGGCTCAGAGGATTTCTTCGGTTAATGCAATGT
CAGCTCTCTGTGAGGCTACAGGGGCAGATGTTTCACAAGTTTCCCATGCT
GTTGGAAAGGACTCGAGAATTGGACCTAAGTTCCTCAATGCCAGTGTTGG
TTTTGGTGGATCCTGCTTTCAAAAGGATATACTCAACTTGGTCTATATAT
GTGAATGCAATGGGCTACCTGAAGTTGCCAACTACTGGAAGCAAGTTATT
AAGGTGAATGACTACCAGAAGAACCGCTTCGTGAACCGGATTGTATCTTC
AATGTTCAACACAGTTTCAGGCAAGAAAATTGCTATCCTCGGATTTGCCT
TCAAGAAGGATACAGGTGACACCCGGGAGACTCCGGCAATTGACGTGTGC
AAAGGCCTGCTAGGTGATAACGCACGCTTGAGCATATATGATCCGCAGGT
TACTGAGGACCAGATCCAAAGGGACCTTTCCATGAACAAGTTCGATTGGG
ATCATCCCATTCATCTCCAGCCAATGAGCCCCACTGCAGTGAAGCAGGTC
AGCGTAGCATGGGATGCTTATGAAGCAACCAAGGATGCTCACTGTTTGTG
CATTCTTACCGAGTGGGACGAATTCAAGACCCTTGATTACCAAAGAATTT
TTGACAACATGCGAAAGCCTGCATTTGTGTTCGATGGGCGTAACGTGGTG
AACGTCGACAACTTGAGGGAGAAGGGTTTCATCGTGTACTCCATCGGAAA
GCCGCTCGACCCTTGGCTCAAGGACATGCCTGCTGTGGCATAA
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protein sequence of Tc03v2_p008060.1

>Tc03v2_p008060.1 ID=Tc03v2_p008060.1|Name=Tc03v2_p008060.1|organism=Theobroma cacao|type=polypeptide|length=481bp
MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRISAWNSDQLPIY
EPGLDEVVKECRGKNLFFSTDIEKHVSEADIIFVSVNTPTKTRGLGAGKA
ADLTYWESAARMIADVSKSNKIVVEKSTVPVKTAEAIEKILTHNSKGIKY
QILSNPEFLAEGTAIQDLFKPDRVLIGGRETPEGQKAIQALKDVYAHWVP
EDRIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVSQVSHA
VGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVI
KVNDYQKNRFVNRIVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVC
KGLLGDNARLSIYDPQVTEDQIQRDLSMNKFDWDHPIHLQPMSPTAVKQV
SVAWDAYEATKDAHCLCILTEWDEFKTLDYQRIFDNMRKPAFVFDGRNVV
NVDNLREKGFIVYSIGKPLDPWLKDMPAVA*
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