Tc03v2_t007160.1

Overview
NameTc03v2_t007160.1
Unique NameTc03v2_t007160.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length693
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Productglutathione S-transferase U9
NoteGlutathione S-transferase U9
Cross References
External references for this mRNA
DatabaseAccession
GeneID18604669
GenbankXM_007037264.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g007160Tc03v2_g007160Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p007160.1Tc03v2_p007160.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto154275auto154275Theobroma cacaoexon
exon-auto154276auto154276Theobroma cacaoexon
exon-auto154277auto154277Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto154278auto154278Theobroma cacaoCDS
CDS-auto154279auto154279Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t007160.1 ID=Tc03v2_t007160.1|Name=Tc03v2_t007160.1|organism=Theobroma cacao|type=mRNA|length=693bp
ATGGGAGAAGAAAACAAAGTGATACTACACGGGGTGTGGGCTAGCCCTTT
CAGCAAGAGAGTGGAACTGGCTCTGAAGCTTAAAGGCATACCTTTTGAGT
ACGTTGAAGAAGATTTGCAGAACAAAAGCCCACAGCTCCTCCGGTGCAAT
CCTGTTCACAAGAAGATTCCTGTTCTTGTTCATAATGGAAAGCCAATTGC
TGAATCGCTCGTCATCCTGGAATATATTGATGAAACCTGGAAGAACAGCC
CTCGTCTCCTGCCCAAGGATCCATATAAAAGAGCCAAAGTTCGGTTCTGG
ACCAGCTTTGTCCAGCAACAGCTGTTTGATACAATGTTCACAGTGACCAA
AACAGAAGGAGAAGCACAAAGGAAAGCGGTCAAGGAAGTTTCAGAAAAAT
TGCAGGTGCTAGAAGAGGGAATAAAAGAGTTGTTTCCAAATGGCAATCCC
TGCATTGATAGCCAGAATATTGGACTCCTTGACATTGTAATCTTATCATT
ACTTGGCCCCCACAAAGTTCAAGAAGAAGTTCTTGGCATAAAGATCATCG
ATCCAGAGAAGACTCCATTGATATTCGCATGGCTGACAGCTATAAACCAG
CTGACTGTAGTGAAAGAGGCGACTCCACCTCATGACAAGTTGGTGGCGCT
TCTTAAATTTCTTAGAGAGAATTCCCTCAAGTCTTCAGCTTAG
back to top

protein sequence of Tc03v2_p007160.1

>Tc03v2_p007160.1 ID=Tc03v2_p007160.1|Name=Tc03v2_p007160.1|organism=Theobroma cacao|type=polypeptide|length=231bp
MGEENKVILHGVWASPFSKRVELALKLKGIPFEYVEEDLQNKSPQLLRCN
PVHKKIPVLVHNGKPIAESLVILEYIDETWKNSPRLLPKDPYKRAKVRFW
TSFVQQQLFDTMFTVTKTEGEAQRKAVKEVSEKLQVLEEGIKELFPNGNP
CIDSQNIGLLDIVILSLLGPHKVQEEVLGIKIIDPEKTPLIFAWLTAINQ
LTVVKEATPPHDKLVALLKFLRENSLKSSA*
back to top