Tc03v2_t006300.1

Overview
NameTc03v2_t006300.1
Unique NameTc03v2_t006300.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length459
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 26 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productubiquitin-conjugating enzyme E2 2
NoteUbiquitin-conjugating enzyme E2 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18604625
GenbankXM_007037199.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g006300Tc03v2_g006300Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p006300.1Tc03v2_p006300.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto152695auto152695Theobroma cacaoexon
exon-auto152696auto152696Theobroma cacaoexon
exon-auto152697auto152697Theobroma cacaoexon
exon-auto152698auto152698Theobroma cacaoexon
exon-auto152699auto152699Theobroma cacaoexon
exon-auto152700auto152700Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto152701auto152701Theobroma cacaoCDS
CDS-auto152702auto152702Theobroma cacaoCDS
CDS-auto152703auto152703Theobroma cacaoCDS
CDS-auto152704auto152704Theobroma cacaoCDS
CDS-auto152705auto152705Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t006300.1 ID=Tc03v2_t006300.1|Name=Tc03v2_t006300.1|organism=Theobroma cacao|type=mRNA|length=459bp
ATGTCAACTCCTGCAAGGAAGAGGCTAATGAGAGATTTTAAGAGGTTGCA
ACAAGATCCACCGGCAGGTATCAGTGGAGCGCCTCAAGACAACAATATAA
TGCTTTGGAATGCAGTTATATTCGGTCCAGATGATACTCCATGGGATGGA
GGCACGTTCAAGTTGACTCTTCAATTCACTGAGGATTATCCAAACAAGCC
TCCAACAGTGAGATTTGTTTCCCGAATGTTTCATCCAAATATTTATGCCG
ATGGAAGTATTTGTTTGGACATTTTACAGAACCAGTGGAGTCCTATATAT
GATGTAGCAGCTATTCTCACATCCATTCAGTCATTGCTGTGTGATCCCAA
CCCAAACTCACCTGCGAACTCAGAAGCTGCTAGGATGTTTAGTGAGAACA
AGCGTGAGTACAACCGAAGAGTAAGGGAGATTGTGGAGCAGAGCTGGACA
GCAGACTAA
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protein sequence of Tc03v2_p006300.1

>Tc03v2_p006300.1 ID=Tc03v2_p006300.1|Name=Tc03v2_p006300.1|organism=Theobroma cacao|type=polypeptide|length=153bp
MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDG
GTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIY
DVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT
AD*
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