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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns |
Product | phenylalanine--tRNA ligase beta subunit, cytoplasmic, transcript variant X3 |
Note | Phenylalanine--tRNA ligase beta subunit, cytoplasmic |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc03v2_t004550.1 ID=Tc03v2_t004550.1|Name=Tc03v2_t004550.1|organism=Theobroma cacao|type=mRNA|length=1776bp ATGCCTACTGTCAGCGTAGGGAGGGATCGTCTTTTCGCTGCCCTGGGCAG ATCTTACACTCAAGAAGAGTTTGAGGATCTATGTTTCAATTTTGGAATTG AACTTGACGATGTGACAACGGAGAAAGCAATAATTTTGAAAGAGAAGAAC TTGAAGGACGAAAAACCTAGTCTTGATGATGAAGTCATTTACAAGATTGA AGTTCCCGCTAACAGGTACGATTTGCTTTGCTTGGAAGGGCTTGCACAAG CCCTTCGCATTTTCAATGGACAGGAAGGGATACCTAGATACACAGTTGCG AACGTTAGTAAGGAATCAATGCTCAAAATGCATGTCAAAAGAGAGACATC TCTAATCCGGCCCTTTGTTGTTTGTGCGGTTTTGAGGGGCATAACTTTTG ATGAGGCAATCTATAACAGTTTTATTGATCTCCAAGATAAACTGCACCAA AATATCTGCAGGAAAAGAGCCCTAGTTGCTATTGGAACTCATGACTTGGA TACATTACAAGGGCCTTTTACATATGAGGCATTGCCACCTCCAAAGATAA ATTTCGTGCCACTGAAACAGGTGAAGAACTTCAGAGCTGATGAGCTGATG GAATTTTACAAGTCAGATTTAAAATTGAAGAAGTTCTTGCACATTATTGA GAAGTCGAAAGTGTTCCCTGTTATATATGACCACAACAGAACTGTTTTGT CCTTACCACCAATTATTAATAGCGCACACTCTGCAATCACTTTGAAGACA AAAAATGTCTTCATTGAATGCACAGCCACTGATTTAACAAAGGCCAAAAT TGTTTTAAATACAATGGTAACGGCATTTTCAGCATATTGTGAGAGGAAAT TTGAGGTGGAACCAGTTGAAGTGATATCCTTTGATGGAAACTCAAGTGTT TATCCTGATTTATCAGAGTATAATATGGAAGTCCCACTATCTTATATTAC TGGTTCAATTGGAGTCCCTTTGGAGGTAGATGAGGTCACTAGTCTATTAA ACCGAATGCAATTGCATGCTGAACAATCTGGATTGGGTGACAACAATATC AATGTGTCTGTACCTCCAACCAGAAGTGATATTCTTCACCCATGTGATGT TATGGAGGATGTTGCTATTGCTTATGGCTACAATAATATTCCAAGGAGAA AGCTTTCGTCTTTGAAGCCACTTCCCTTAAACCAGCTCAGTGATCTTGTC AGATATGAGATTGCAATGAACGGTTTTTCGGAGGTGTTGACATGGATTTT ATGTTCTAAGAAAGAGAATTTTGAAATGTTAAATCGAAAGGATGACAAAT CAACTGCAGCGATTATTGGAAACCCCCGCTCCTCTGATTTTGAGGTGGTA CGTACAAGTCTCATGCCTGGCATGTTGAAGACTGTTGGACATAACAAAGA CCATCCAAAGCCCATAAAGATTTTTGAAGTGGGTGATGTAGTACTTCTGG ATGAGAAGAAAGATGTCGGTGCATCAAACCGTCGCCTACTTGCTGCACTA TATTGTGGTGCTAACTCAGGTTTTGAGCTGATTCATAGCCTAGTGGACAG AATTATGGAAGTAATTGGGACTCCTTTTGTTCAAGTTGGAGATAACACAG GATACTATATAGAGCTTTCTGATGAACCTGAATTTCTATCGGGTAGGCAA GCCAAAATAATTTACAAAGGAAGGTGCATTGGCATTTTTGGTATTGTGCA GCCTGAGGTGTTGAACAATTTTGATATTCCGGATCCATGCTCCTTCGTGG AACTTGACATGGAGAGCTTTTTGTAG back to topprotein sequence of Tc03v2_p004550.1 >Tc03v2_p004550.1 ID=Tc03v2_p004550.1|Name=Tc03v2_p004550.1|organism=Theobroma cacao|type=polypeptide|length=592bp
MPTVSVGRDRLFAALGRSYTQEEFEDLCFNFGIELDDVTTEKAIILKEKN LKDEKPSLDDEVIYKIEVPANRYDLLCLEGLAQALRIFNGQEGIPRYTVA NVSKESMLKMHVKRETSLIRPFVVCAVLRGITFDEAIYNSFIDLQDKLHQ NICRKRALVAIGTHDLDTLQGPFTYEALPPPKINFVPLKQVKNFRADELM EFYKSDLKLKKFLHIIEKSKVFPVIYDHNRTVLSLPPIINSAHSAITLKT KNVFIECTATDLTKAKIVLNTMVTAFSAYCERKFEVEPVEVISFDGNSSV YPDLSEYNMEVPLSYITGSIGVPLEVDEVTSLLNRMQLHAEQSGLGDNNI NVSVPPTRSDILHPCDVMEDVAIAYGYNNIPRRKLSSLKPLPLNQLSDLV RYEIAMNGFSEVLTWILCSKKENFEMLNRKDDKSTAAIIGNPRSSDFEVV RTSLMPGMLKTVGHNKDHPKPIKIFEVGDVVLLDEKKDVGASNRRLLAAL YCGANSGFELIHSLVDRIMEVIGTPFVQVGDNTGYYIELSDEPEFLSGRQ AKIIYKGRCIGIFGIVQPEVLNNFDIPDPCSFVELDMESFL* back to top
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