Tc03v2_t004010.2

Overview
NameTc03v2_t004010.2
Unique NameTc03v2_t004010.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1482
Properties
Property NameValue
NotePhosphoethanolamine N-methyltransferase 1
Model evidenceSupporting evidence includes similarity to: 18 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productphosphoethanolamine N-methyltransferase 1, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18604331
GenbankXM_007036740.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g004010Tc03v2_g004010Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p004010.2Tc03v2_p004010.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto148488auto148488Theobroma cacaoexon
exon-auto148489auto148489Theobroma cacaoexon
exon-auto148490auto148490Theobroma cacaoexon
exon-auto148491auto148491Theobroma cacaoexon
exon-auto148492auto148492Theobroma cacaoexon
exon-auto148493auto148493Theobroma cacaoexon
exon-auto148494auto148494Theobroma cacaoexon
exon-auto148495auto148495Theobroma cacaoexon
exon-auto148496auto148496Theobroma cacaoexon
exon-auto148497auto148497Theobroma cacaoexon
exon-auto148498auto148498Theobroma cacaoexon
exon-auto148499auto148499Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto148500auto148500Theobroma cacaoCDS
CDS-auto148501auto148501Theobroma cacaoCDS
CDS-auto148502auto148502Theobroma cacaoCDS
CDS-auto148503auto148503Theobroma cacaoCDS
CDS-auto148504auto148504Theobroma cacaoCDS
CDS-auto148505auto148505Theobroma cacaoCDS
CDS-auto148506auto148506Theobroma cacaoCDS
CDS-auto148507auto148507Theobroma cacaoCDS
CDS-auto148508auto148508Theobroma cacaoCDS
CDS-auto148509auto148509Theobroma cacaoCDS
CDS-auto148510auto148510Theobroma cacaoCDS
CDS-auto148511auto148511Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t004010.2 ID=Tc03v2_t004010.2|Name=Tc03v2_t004010.2|organism=Theobroma cacao|type=mRNA|length=1482bp
ATGGCGGCTAACGGAGTTGTAGCAGATGAGCGAGAGGTTCAAAAGGACTA
TTGGATGGAGCACTCACTCGATTTGACAGTGGAGGCTATGATGCTTGACT
CCAAAGCCGCTGATCTTGACAAAGAAGAGCGTCCGGAAGTGCTCTCTCTA
CTCCCACCATATGAGGGGAAGTCCATTTTGGAGCTAGGAGCTGGCATTGG
TCGATTTACTGGTGAATTAGCTCAGAAGGCTGGTCATGTTATAGCTTTAG
ACTTCATTGAGAGCGTTATAAAGAAGAATGAAAGCATCAATGGACATTAT
AAGAATGCCAAATTCCTCTGTGCTGACGTGACTTCCCCAGATTTGAAATT
TTCCGAAGGATCACTGGACTTGATATTTTCAAATTGGCTGCTAATGTATC
TTTCAGATAAAGAGATTGAGAATTTGGCAGAAAGGATGGTGAAATGGCTG
AAGGTTGGTGGATATATTTTCTTCAGGGAGTCTTGTTTTCATCAATCCGG
TGACTGCAAGCGAAAGCACAACCCAACTCACTACCGTGAGCCCAGATTTT
ACACAAAGGTTTTTAAAGAATGCCATGCAACTGATACGTCAGGAAATTCT
TTTGAACTTTCTCTAGTCAGCTGCAAGTGCATCGGAGCTTATGTTAGGAA
CAAAAGGAATCAAAATCAGATTTGCTGGATATGGCAGAAAGTCAGTTCAG
ATAATGATAGGGGATTCCAGCGCTTTCTGGACACTGTTCAGTACAAATGT
AGTGGCATACTCCGTTATGAGCGTGTCTTTGGAGAAGGCTTTGTGAGCAC
AGGAGGAATTGAAACAACAAAAGAATTTGTGGGGAAGTTGGATCTCAAGC
CTGGCCAAAAGGTTCTGGATGTTGGCTGTGGCATTGGTGGAGGTGACTTT
TATATGGCAGAGAAATTTGATGTCCATGTTGTCGGCATCGATCTCTCCAT
AAATATGATTTCTTTTGCTCTTGAACGAGCTATTGGCATGAATTGCTCAG
TGGAATTTGAAGTTGCTGATTGCACTAAGAAGACTTATCCGGACAACAGT
TTTGATGTTATCTACAGCCGTGACACCATTCTACACATTCAAGACAAACC
TGCACTATTTAGATCTTTCTACAAATGGTTGAAGCCAGGGGGCAAAGTTC
TTATTAGTGATTACTGCAAAAATGCTGGAACTCCATCATCAGAATTTGCT
GAGTACATCGAGCAGAGAGGGTATGATCTCCATGATGTAAAAGCATATGG
CCAGATACTTAGTGATGCTGGTTTTGATGAGGTCATTGCAGAGGATCGGA
CTGAACAGTTCCTACAAGTTCTGCAGCGTGAATTAAATGAAGTCGAGAAG
AACAAGGATGCATTCGTCTCTAGCTTTTCTCAAGAAGACTATGATGATAT
AGTTGGTGGATGGAAGGCCAAGCTGATAAGGAGCTCATCTGGCGAGCAGA
GATGGGGCCTTTTCATTGCCAAGAAAAACTGA
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protein sequence of Tc03v2_p004010.2

>Tc03v2_p004010.2 ID=Tc03v2_p004010.2|Name=Tc03v2_p004010.2|organism=Theobroma cacao|type=polypeptide|length=494bp
MAANGVVADEREVQKDYWMEHSLDLTVEAMMLDSKAADLDKEERPEVLSL
LPPYEGKSILELGAGIGRFTGELAQKAGHVIALDFIESVIKKNESINGHY
KNAKFLCADVTSPDLKFSEGSLDLIFSNWLLMYLSDKEIENLAERMVKWL
KVGGYIFFRESCFHQSGDCKRKHNPTHYREPRFYTKVFKECHATDTSGNS
FELSLVSCKCIGAYVRNKRNQNQICWIWQKVSSDNDRGFQRFLDTVQYKC
SGILRYERVFGEGFVSTGGIETTKEFVGKLDLKPGQKVLDVGCGIGGGDF
YMAEKFDVHVVGIDLSINMISFALERAIGMNCSVEFEVADCTKKTYPDNS
FDVIYSRDTILHIQDKPALFRSFYKWLKPGGKVLISDYCKNAGTPSSEFA
EYIEQRGYDLHDVKAYGQILSDAGFDEVIAEDRTEQFLQVLQRELNEVEK
NKDAFVSSFSQEDYDDIVGGWKAKLIRSSSGEQRWGLFIAKKN*
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