Tc03v2_t003650.1

Overview
NameTc03v2_t003650.1
Unique NameTc03v2_t003650.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length642
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 Protein
Productuncharacterized LOC108661117
NoteCopia-like retrotransposable element, putative
Cross References
External references for this mRNA
DatabaseAccession
GeneID108661117
GenbankXM_018117002.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g003650Tc03v2_g003650Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p003650.1Tc03v2_p003650.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto147946auto147946Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto147947auto147947Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t003650.1 ID=Tc03v2_t003650.1|Name=Tc03v2_t003650.1|organism=Theobroma cacao|type=mRNA|length=642bp
ATGGCCTCAACTAGTTACAATGCACCAGCACCTCCTGTCTTCTCAGGAGA
AAATTATGCAATATGGTCGGTGAAAATGGAAGCTTACCTGCGAGCATTTG
ACTTGTGGGAAGTGGTGGAAGTTGGTGGAGATCCATCTGAACAAAGACAA
AATCCCACCATAGCGCAGATGAAGCAGTACAGTGAGGAAGTTGCAAGGAG
GTTTAAGGCCCTCTCTTGCATCCATTCGGCAGTGTCCGATATCATTTTTA
CACGTATTATCACGTGTAAGTCTGCTAAAGAAGCTTGGGATAAATTAAAA
GAAGAGTTTCAAGGCAGTGTTCGAACCAGGCAAATCCAAGCTCTAAATCT
CTGGAGAGAATTTGAGATACTGAGGATGAAAGAGGAAGAAGGCTTAAAGG
ATTATACTGATAAAGTTATTAAAGTGGTTAACCAGCTTAAGCTCTTAGGA
GAAGATGTACCAGAAAAAAGGGTGGTCAACAAAATTCTGGTTAGCTTACC
AGAAAAATTCGAAGCCAAGATTTCATCCTTAGAAGACTCTAAGGACCTCT
CAAGCTTCACGGTTGTGGAGTTGGTAAATGCCCTACACGCATCAGAACAA
AGAAGAGCAATCCGAGTGGTCACAGTGAGAGTGCTCTATTAG
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protein sequence of Tc03v2_p003650.1

>Tc03v2_p003650.1 ID=Tc03v2_p003650.1|Name=Tc03v2_p003650.1|organism=Theobroma cacao|type=polypeptide|length=214bp
MASTSYNAPAPPVFSGENYAIWSVKMEAYLRAFDLWEVVEVGGDPSEQRQ
NPTIAQMKQYSEEVARRFKALSCIHSAVSDIIFTRIITCKSAKEAWDKLK
EEFQGSVRTRQIQALNLWREFEILRMKEEEGLKDYTDKVIKVVNQLKLLG
EDVPEKRVVNKILVSLPEKFEAKISSLEDSKDLSSFTVVELVNALHASEQ
RRAIRVVTVRVLY*
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