Tc03v2_t003380.1

Overview
NameTc03v2_t003380.1
Unique NameTc03v2_t003380.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1239
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productcyclin-dependent kinase D-3
NoteCyclin-dependent kinase D-1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18604245
GenbankXM_007036613.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g003380Tc03v2_g003380Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p003380.1Tc03v2_p003380.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto147417auto147417Theobroma cacaoexon
exon-auto147418auto147418Theobroma cacaoexon
exon-auto147419auto147419Theobroma cacaoexon
exon-auto147420auto147420Theobroma cacaoexon
exon-auto147421auto147421Theobroma cacaoexon
exon-auto147422auto147422Theobroma cacaoexon
exon-auto147423auto147423Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto147424auto147424Theobroma cacaoCDS
CDS-auto147425auto147425Theobroma cacaoCDS
CDS-auto147426auto147426Theobroma cacaoCDS
CDS-auto147427auto147427Theobroma cacaoCDS
CDS-auto147428auto147428Theobroma cacaoCDS
CDS-auto147429auto147429Theobroma cacaoCDS
CDS-auto147430auto147430Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t003380.1 ID=Tc03v2_t003380.1|Name=Tc03v2_t003380.1|organism=Theobroma cacao|type=mRNA|length=1239bp
ATGACAGAAATGGATCCGTCGAAGAAAGTGGCCGATAGGTATTTGAAGCG
CGAGGTTCTTGGTGAAGGTACTTATGGTGTCGTCTACAAAGCCATTGATA
CTAAGACAGGGCAGACAGTTGCAATTAAGAAAATTCGGCTTGGGAAGCAA
AAGGAAGGGATCAATTTTACAGCACTCAGAGAAATTAAACTTCTTAAGGA
GCTCAAAGATCCAAATATAATTGAGTTAATAGATGCATTCCCACACAAGG
GTAACTTGCATCTTGTGTTTGAATTCATGGAGACTGACCTTGAAGCTGTT
ATTCGAGATCGTAATATATTCCTCTCACCGGCTGACATCAAATCGTACAT
TCAGATGACGTTGAAAGGGCTTGCTTTTTGCCACAAGAAATGGGTTTTAC
ATAGGGATATGAAGCCAAATAATTTGCTAATAGGACCCAATGGACAACTT
AAACTTGCAGACTTTGGTTTAGCACGCATATTTGGGAGCCCAGATCGTAA
GTTTACTCACCAGGTGTTTGCTCGATGGTACAGAGCTCCTGAGTTACTTT
TTGGTACCAAGCAATATGGTTCTGGTGTGGATGTTTGGGCAGCTGCCTGT
ATATTTGCTGAACTTCTCCTACGACGACCATTTCTGCAGGGCACCAGTGA
CATTGATCAATTAGGAAAGATCTTTGCAGCTTTTGGGACACCAACGTCTT
CTCAATGGCCAGATATGGTCTACCTTCCTGATTATGTAGAATACCAATAT
GTTCCTGCACCTCCTTTGCGTTCGTTGTTTCCAATGGCCAGTGATGATGC
TCTAGATCTTTTATCAAAAATGTTCACTTATGACCCAAAAGTGAGGATTT
CCGTGCAGCAAGCGTTAGAGCACAGGTATTTTTCATCTGCACCTCCACCT
ACAGATCCGCCTAAGCTCCCTAGGCCTAATCCTAAATCGCGAGTGTCAGA
TTATAATCCCCAGGAGGGTCCCACTGTTCTTTCTCCCCCACGAAAGTCAA
GGAGAGTAATGCCGGATCGTGATAGGTTTGAAGGTAATTCTGACCAAGCT
GAGAAGGTTGATGACCGTGTTGGTGAGAGACAGGCAGTTGGTGACATTGC
AGGAAAGAATGAACAGGTGCCAATGTCAATAGATTTTTCAATCTTTGGCT
CAAAACCTCTGAGTAGACCTACAATTAATAGTGCTGATAGATCTCACTTG
AAGAGGAAACTTGATCTTGAATTCCAACACAATGAATAA
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protein sequence of Tc03v2_p003380.1

>Tc03v2_p003380.1 ID=Tc03v2_p003380.1|Name=Tc03v2_p003380.1|organism=Theobroma cacao|type=polypeptide|length=413bp
MTEMDPSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ
KEGINFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAV
IRDRNIFLSPADIKSYIQMTLKGLAFCHKKWVLHRDMKPNNLLIGPNGQL
KLADFGLARIFGSPDRKFTHQVFARWYRAPELLFGTKQYGSGVDVWAAAC
IFAELLLRRPFLQGTSDIDQLGKIFAAFGTPTSSQWPDMVYLPDYVEYQY
VPAPPLRSLFPMASDDALDLLSKMFTYDPKVRISVQQALEHRYFSSAPPP
TDPPKLPRPNPKSRVSDYNPQEGPTVLSPPRKSRRVMPDRDRFEGNSDQA
EKVDDRVGERQAVGDIAGKNEQVPMSIDFSIFGSKPLSRPTINSADRSHL
KRKLDLEFQHNE*
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