|
Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 1 EST, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns |
Product | DExH-box ATP-dependent RNA helicase DExH3, transcript variant X1 |
Note | DExH-box ATP-dependent RNA helicase DExH3 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc03v2_t003260.2 ID=Tc03v2_t003260.2|Name=Tc03v2_t003260.2|organism=Theobroma cacao|type=mRNA|length=3582bp ATGCCCTGTTACGCAGCCATATTTCAGGGCTATCTCAGGACAACCGCCAT GTCTCTGAGACCCAATTCCCTCCAACTCAACAACACCCCTAAAACCCTTT TAAAGCCTTGTTTCTTCTCCTTTCTGTCCAGGAAACCCCCTGCTTCTTTC AGGCGTTTGCATTTGAGGCATGGCCTCGTCACGTGCTCTGGGTATCGGGC TGCTACTGCTTCTTCCCGGACTCCTGGCTTGGATTGGAGGAACATTGCCT TGCCTTCTTTGCAGCAGCAGCAAAGCTCTAATTACGGTCGCTATGCTTAC CAGGATGTTTCCAGTGATGACTCGGACCATGAATTCGGTTCTACACAGTC TCAAATGGCTGCTTCTACCCTTGATAATATTGATGAATGGAGATGGAAAT TGACTATGCTTCTTCGCAACAAAGATGAGCAAGAGGTGGTGTCAAGGGAG AGAAAGGACAGGCGTGACTTTGAGCAACTTTCAGCTCTAGCAACCAGGAT GGGTTTGCACAGCTGTCAATATGCAAAAGTAGTTGTTTTTAGTAAACTTC CACTGCCAAATTATAGATCTGATCTGGATGATAAGCGGCCACAAAGAGAG GTGATCTTACCTTTTGGCCTGCAAAGAGATGTAGATCTTCACCTTAAAGC TTACCTTACTCGTAAGGCTATAAACAGTGCTAACTTTTCAGATAAACCTT TGTCAAGATCAAGCTGTGGCGGAAGAATTGCTGCGGATGAAGTACCTATT GAGCAGGAAGAGCCCTTTACAAAGATTAGTGTTGTCATGGAGAGAATTCT TCTGCGGAGAAGTTTGCAGCTACGTAACAGGCAACAAGAATGGCAGGAGT CTCCTGAAGGACTAAAGATGTTTGAATTTCGAAGAAGCCTGCCAGCATAT AAATTGAGGGATGCTTTGCTAAGTGTCATCTCACAGAATCAGGTGGTTGT TGTCTCTGGTGAAACTGGTTGTGGTAAAACCACACAACTTCCTCAGTACA TATTAGAATCTGAGATAGAAGCTGCTCGTGGAGCTTCCTGTAGTATCATA TGTACTCAGCCTAGAAGGATATCTGCTATGGCTGTTTCTGAAAGAGTTGC TGCAGAAAGAGGGGAGAAATTGGGAGAATCTGTTGGTTATAAGGTACGCC TTGAGGGAATGAAAGGGAGAGACACCCGCCTTCTCTTTTGTACCACTGGC ATTTTACTGAGGCGACTACTTGTTGACAGAGATTTGAGAGGTGTAAGTCA TGTTATTGTTGATGAGATTCATGAGCGTGGAATGAATGAAGATTTTCTTC TTATTGTCTTGAAAGATCTCCTTCCTCGTAGGCCAGAGTTGAGGTTGATT TTGATGAGTGCAACCTTAAATGCAGAGCTCTTTTCTTCTTACTTTGGTGG TGCCCCGACAATCCATATTCCTGGTTTTACATACCCTGTCCGAGAACATT TTCTGGAGAATATTCTAGAGGTGACTGGATACAGGTTGACTCCATATAAT CAAATTGATGATTATGGTCAAGAAAAGATGTGGAAAATGCAGAAACAGGC CCAATCTCTCAGAAAGAGGAAGAGCCAGCTAACTTCTGCAGTTGAGGATG CACTTGAAAGGGCCGACTTTAGGGGGTATAGTTTGCGGACTCGGGAGTCT TTATCTTGTTGGAATCCTGACTCAATTGGTTTCAATCTAATTGAGCATGT TCTTTGCCACATCATAAAGAAAGAGAGGCCTGGTGCTGTTTTGGTTTTCA TGACTGGTTGGGATGACATAAACTCTCTAAAAGATCAGCTCCAGGTTCAT CCTCTCCTAGGGGACCCTGGCAAGGTGTTGTTGCTTGCATGTCATGGTTC CATGCCTAGCTCTGAGCAGAGGTTAATATTTGAAAAGCCCAAAGATGGAG TGAGAAAAATAGTTCTAGCTACTAATATGGCTGAGACTAGCATCACCATC AATGATGTGGTTTTTGTGGTTGATTGTGGAAAGGCAAAAGAAACATCCTA TGATGCACTGAATAATACTCCTTGTTTGCTTCCATCCTGGATCTCAAAGG CTGCTGCCCGGCAAAGAAGGGGAAGAGCTGGCCGTGTTCAGCCAGGCGAG TGTTACCATCTCTATCCCAAATGCGTGTATGATACTTTTGCTGATTATCA ACTGCCAGAGCTTTTAAGGACACCACTACAGTCTCTATGTTTGCAAATAA AAAGTCTAGAACTTGGAAGTATCACAGAGTTTCTTTCTAGGGCATTGCAG CCTCCAGAACTTCTGTCGGTGCAAAATGCTGTTGAATATCTGAAGATTAT TGGAGCTTTAGATGAGAATGAGAACTTAACGGTGCTAGGACGTAACTTGT CAATGCTTCCGGTTGAGCCTAAACTTGGGAAAATGCTGATATTGGGGGCT ATTTTTAACTGTTTAGATCCAATAATGACTGTTGTTGCCGGGCTCAGTGT CAGGGATCCATTTCTGATGCCATTTGACAAGAAGGATCTTGCTGAATCGG CAAAAGCGCAGTTCTCAGGCCAGGAGTACAGTGATCATATTGCACTTGTC CGAGCCTATGAGGGCTGGAAAGAAGCTGAAAGAGAGCAGTCTGGTTATGA GTATTGTTGGAAGAATTTTCTTTCTGCACAAACTCTCAAGGCCATTGACT CTTTACGAAAGCAGTTCTTTTATTTGCTCAAGGATACTGGTCTAGTTGAT CAAAATATAGAAAACTGCAATAAATGGAGCTACGATGAGCATCTCATACG GGCAGTCATTTGTGCTGGATTGTTTCCTGGGATATGCTCTGTTGTGAACA AAGAGAAGTCAATTTCACTGAAAACAATGGAGGATGGACAGGTTCTTCTG TACTCGAATTCTGTAAATGCTGGGGTACCCAAAATTCCATACCCATGGCT AGTTTTCAATGAAAAGGTAAAAGTGAATTCAGTATTTCTCCGTGATTCAA CTGGTGTTTCCGATTCTGTGCTGCTTTTATTTGGAGGGAACATTTCTAGA GGTGGACTAGATGGACATCTAAAAATGTTGGGAGGATATTTGGAGTTTTT CATGAAACCTGCTTTAGCTGATACATATTTAAGCTTGAAGAGAGAGCTTG AGGAACTTATTCAGAAGAAACTTTTGAACCCTACGTTAGATATGCCGTCA AGCAGTGAGCTGCTCTCTGCAGTAAGGTTGCTGGTCTCAGAAGACCAATG TGAAGGCAGATTTGTTTTTGGCCGTCAGTTGCCAGTATCCTCAAAGAAGA CGGTTAAAGAGAAAATACCAGGTATAGGTGGGGGTGATAATTCCAAGAGT CAGCTGCAAACAGTGCTTGCCAGGGCTGGACATGGAGCTCCCATCTACAA GACAAAACAGCTAAAAAATAACCAGTTTCGCTCTACTGTTATCTTTAATG GGCTGGATTTTATGGGGCAGCCTTGCAGCAATAAGAAACTTGCAGAAAAG GATGCAGCTGCTCAGGCTCTGCTGTGGTTGAGGGGTGAAGACCATTTTTC TTCCAGAGATGTTGAACATGCATCAGTGCTTTTGAAAAAGAGCAAAAAGA GAACTTCAGTCCATGCTACTAAGTGGAGTTAA back to topprotein sequence of Tc03v2_p003260.2 >Tc03v2_p003260.2 ID=Tc03v2_p003260.2|Name=Tc03v2_p003260.2|organism=Theobroma cacao|type=polypeptide|length=1194bp
MPCYAAIFQGYLRTTAMSLRPNSLQLNNTPKTLLKPCFFSFLSRKPPASF RRLHLRHGLVTCSGYRAATASSRTPGLDWRNIALPSLQQQQSSNYGRYAY QDVSSDDSDHEFGSTQSQMAASTLDNIDEWRWKLTMLLRNKDEQEVVSRE RKDRRDFEQLSALATRMGLHSCQYAKVVVFSKLPLPNYRSDLDDKRPQRE VILPFGLQRDVDLHLKAYLTRKAINSANFSDKPLSRSSCGGRIAADEVPI EQEEPFTKISVVMERILLRRSLQLRNRQQEWQESPEGLKMFEFRRSLPAY KLRDALLSVISQNQVVVVSGETGCGKTTQLPQYILESEIEAARGASCSII CTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTG ILLRRLLVDRDLRGVSHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLI LMSATLNAELFSSYFGGAPTIHIPGFTYPVREHFLENILEVTGYRLTPYN QIDDYGQEKMWKMQKQAQSLRKRKSQLTSAVEDALERADFRGYSLRTRES LSCWNPDSIGFNLIEHVLCHIIKKERPGAVLVFMTGWDDINSLKDQLQVH PLLGDPGKVLLLACHGSMPSSEQRLIFEKPKDGVRKIVLATNMAETSITI NDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGE CYHLYPKCVYDTFADYQLPELLRTPLQSLCLQIKSLELGSITEFLSRALQ PPELLSVQNAVEYLKIIGALDENENLTVLGRNLSMLPVEPKLGKMLILGA IFNCLDPIMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSGQEYSDHIALV RAYEGWKEAEREQSGYEYCWKNFLSAQTLKAIDSLRKQFFYLLKDTGLVD QNIENCNKWSYDEHLIRAVICAGLFPGICSVVNKEKSISLKTMEDGQVLL YSNSVNAGVPKIPYPWLVFNEKVKVNSVFLRDSTGVSDSVLLLFGGNISR GGLDGHLKMLGGYLEFFMKPALADTYLSLKRELEELIQKKLLNPTLDMPS SSELLSAVRLLVSEDQCEGRFVFGRQLPVSSKKTVKEKIPGIGGGDNSKS QLQTVLARAGHGAPIYKTKQLKNNQFRSTVIFNGLDFMGQPCSNKKLAEK DAAAQALLWLRGEDHFSSRDVEHASVLLKKSKKRTSVHATKWS* back to top
|