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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 2 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns |
Product | DNA-directed RNA polymerase III subunit 1, transcript variant X1 |
Note | DNA-directed RNA polymerase III subunit 1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc03v2_t000850.1 ID=Tc03v2_t000850.1|Name=Tc03v2_t000850.1|organism=Theobroma cacao|type=mRNA|length=4188bp ATGCAGCAAAAATTTACAAAACGGCCGTACATCGAAGATGTCGGGCCGCG AAAAATAAAAAGCATTCAATTTTCTATGTTATCAGATTCGGAGATAGCCA AAGCTGCTGAAGTTCAAGTTTATCAAGCTCTTTACTATGATCCTAAAAGC CGCCCCATCGAAGGCGGCTTATTGGATCCCCGAATGGGTCCTGCAAATAA AAGCGGGAAATGTGCAACCTGCCATGGAAATTTTGCGGATTGCCCAGGCC ATTACGGATACTTATCTCTTGCCCTTCCTGTTTATAATGTTGGATATTTA AGTACAATTTTAGACATTTTAAAGTGCATCTGTAAGTCTTGTTCTCGTAT AATTTTGGATGAGAAATTATGCAAAGATTATCTGAAGAGGATGAGAAGTC CGAAGATCGATGCATTAAAGAAGGGTGATATAATGAAAAGTATCGTGAAG AAGTGTAGTGCTATGGCTAGTAGTAAAGCTGTGAAGTGCTGGAGATGTGG ATATGTAAATGGTACGGTGAAGAAGGCTGTGGCAATGTTGGGCATTATTC ATGATCGTTCAAAAATTAATGACAACAGTTTGGAAGAATTTAGATCAGCA ATTTCCCACACAAAGGAGTCCAAGGCATCCTTCAACGTTGCTACTTATGT TCTAAACCCTGTCAAAGTGCTTTCTCTTTTTAAAAGGATGACTGATTTGG ATTGCGAATTGCTATATCTTTCTGATAGACCTGAGAAGCTCATAATTACA AATATTGCTGTGCCACCTATACCTATCCGACCTTCAGTCATTATGGATGG GTCACAGAGCAACGAAAATGACATTACTGAGAGGTTGAAACGAATTATTC AGGCAAATGCTAGCCTTCGTCAGGAATTAGTAGAAACAAATGCTGCATTC AAATGTCTGGGTGGCTGGGAGATGCTTCAAGTTGAAGTTGCACAGTACAT TAATAGTGATGTTCGTGGTGTTCCATTTAGTATGCAAGTGTCAAAGCCGC TGAGTGGTTTTGTTCAGCGCATCAAAGGGAAGCACGGACGCTTTCGTGGT AACTTATCTGGCAAACGTGTTGAATATACTGGCCGGACTGTTATATCACC TGACCCCAATCTGAAAATTACTGAGGTGGCTATCCCAATCCATATGGCTC GGATTTTGACTTATCCAGAACGTGTTTCCAATCACAATATAGAGAAGCTA AGGCAGTGTGTTCGTAATGGTCCTTCGAAATACCCTGGTGCAAGGATGGT CAGATATCCTGATGGTTCAGCTAGGCTCTTGATAGGTGATTACAGAAAGC GTCTTGCTGATGAACTAAAATTCGGTTGTGTAGTTGATCGCCATTTAGAA GATGGAGATATTGTTCTTTTCAATAGACAGCCAAGCTTGCATAGAATGTC TATCATGTGCCATAGGGCGAGAATCATGCCGTGGAGAACATTGCGATTCA ATGAGTCTGTTTGTAACCCATATAATGCTGATTTTGATGGTGATGAAATG AACATGCATGTCCCACAAACGGAGGAGGCTCGAACAGAGGCACTCATGTT GATGGGGGTGCAAAATAATTTATGCACGCCAAAAAATGGAGAAATTTTGG TTGCTTCTACTCAAGATTTTTTAACATCTTCCTTTCTCATTACAAGGAAG GATATTTTCTATGATCGTGCAGCTTTTTCTCTTATATGCTCCTATATGGG TGATGGCATGGATCTTATAGATTTGCCGACTCCAGCATTACTTAAGCCAA TAGAGCTTTGGACTGGTAAGCAATTGTTTAGTGTTCTATTACGCCCACAT GCGAGTGTGAGAGTCTACTTGAATCTTATTGTTAAGGAAAGGAACTACTC CAAGAAGATTATCAAAAGGATTGGAAATAAGGAAATAGAAGTAGAAACAA TGTGCCCAGACGATGGATTTGTCTATATTCGGAATAGTGAGCTTATATGT GGGCAACTGGGGAAGGCTACTTTAGGAAATGGCAACAAGGATGGACTTTA TTCTGTTCTTCTCAGGGACTACAATGCACATGCTGCTGCTGCCTGCATGA ATCGGTTAGCTAAACTGAGTGCTCGATGGATAGGGAATCACGGCTTTTCA ATTGGAATTGATGATGTCCAACCGGGGAAAAGGTTGAATGATGAGAAAGC ATTAACAATTTCAGGAGATTATAAGAAATGTGATGAAGAGATACAGACGT TCAATGAAGGAAAACTAAAGCCTAAACCTGGTTATGATGCTGCTCAAACA CTAGAAGCTAATGTAACTGCAATATTGAATAACATTCGGGACAAAACGGG GAAGGTATGCATGAAAGAACTACATTGGAGAAACAGTCCATTGATCATGT CGCAATGTGGTTCCAAGGGTTCTGCTATAAATATAAGTCAAATGATTGCA TGTGTTGGTCAGCAATCAGTTGGTGGTCGTCGTGCTCCTAATGGATTCAT AGATCGTAGCCTTCCTCATTTTCATAGAGGATCAAAAACCCCTGCTGCTA AAGGCTTTGTTGCAAATTCATTCTACAGTGGTTTGACTGCTACAGAGTTT TTCTTTCACACGATGGCTGGGCGAGAAGGCCTTGTGGATACAGCTGTAAA AACAGCTGAGACAGGATACATGTCTCGTAGACTGATCAAAGCATTGGAAG ACTTGAGCATTCATTATGATAACACCGTTCGCAATGCAAGTGGATGTATA GTTCAATTTATTTATGGAGATGATGGCATGGATCCTGCATGTATGGAGGG AAAAAGTGGATTTCCTCTGAATTTTGACAGATTGTTAATGAAAGTAAAGG CTACCTGTCCTCCAATAGAACAGAAATGCTTACACGTTGGTTCTATCATG CCAATGTTAGAGGAGCAGCTTGCTAAACATGATCCTGCTGGGGTTTGCTC TGAAGCCTTCAAAAAATCTCTGAAAGGGTTCCTTAAAAGTCAGACGAACG AACTAGACAGAGTGATGAAATTGGTTAACAATTGTGCACAGAAGAGTGAG ATACTTGAGAAAGTTGGCCATAAAATATCTGGTATATCTGACAGGCAGTT GGAGGTTTTTGTTAGTACTTGCATTTCTCGTTATCGCTCTAAAGTAATTG AAGCTGGAACTGCCATTGGAGCTATTGGAGCTCAGAGTATTGGTGAACCT GGGACACAGATGACGCTGAAGACATTTCACTTTGCTGGAGTTGCGAGCAT GAATATTACACAAGGAGTTCCTCGTATCAAAGAAATCATAAATGCAGCCA AAAGAATTAGTACTCCCGTAATTACTGCAGAACTTGAGTTTGATGATAAT CCGAACATTGCACAAATAGTAAAAGGTCGAATTGAGAAAACCGTTTTAGG GCAGGTTGCTAAGAGCATCAAGATTGTAATTACTTCAAGATCAGCATCAG TTGTTATCACCCTTGACATGGAAATAATCCTAGATGCAGAATTGTATATA GATGCAAATATTGTGAAAGAATCAATTTTGCAAACTCCGAAAATTAAACT AAAGGAGCAGCATGTGAAGGTTTTGGATGGTAGAAAATTGGAAGTTGTTC CTCCAGCTGATAGAAGTCAAATTCATTTTGAACTTCATTCTCTTAAAAAT CTGCTTCCACTGGTTGTGGTAAAGGGGATAAAAACTGTTGAACGCACTGT TGTTTATGACAAGAACAAAGAGAAGAAAAATCAGAAAGAAGAAGAGACAA CGAAGCATTTCCAGTTGCTTGTAGAAGGCATGGGGCTCCAAGCAGTTATG GGCATTGAAGGAATTGATGGACGGAGGACATGGAGTAACCATGTAATGGA AATGGAGCAGATATTGGGAATTGAAGCTGCAAGGAAATGCATAATCGATG AGATAGCACAAACTATGGAACATCATGGAATGACTATAGACAGACGCCAT ATGATGCTTCTAGCAGATGTGATGACATTTAGGGGGGAAGTTCTTGGCAT CACAAGATTTGGAATCCAAAAAATGGACAAGAGTATATTGATGCTGGCTT CATTTGAGAGGACAGCTGATCACCTTTTCAATGCTGCTGTTAACGGGAGG GATGACAAGATTGAGGGAGTTACTGAGTGCATCATCATGGGCATCCCAAT GCAGATAGGCACTGGAATACTCAAAGTTATACAGAGAGTTGATCCACCTC CTATGCTACGATATGGACCAGATCCAGTTTTATCTTGA back to topprotein sequence of Tc03v2_p000850.1 >Tc03v2_p000850.1 ID=Tc03v2_p000850.1|Name=Tc03v2_p000850.1|organism=Theobroma cacao|type=polypeptide|length=1396bp
MQQKFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKS RPIEGGLLDPRMGPANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYL STILDILKCICKSCSRIILDEKLCKDYLKRMRSPKIDALKKGDIMKSIVK KCSAMASSKAVKCWRCGYVNGTVKKAVAMLGIIHDRSKINDNSLEEFRSA ISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLSDRPEKLIIT NIAVPPIPIRPSVIMDGSQSNENDITERLKRIIQANASLRQELVETNAAF KCLGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKGKHGRFRG NLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKL RQCVRNGPSKYPGARMVRYPDGSARLLIGDYRKRLADELKFGCVVDRHLE DGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEM NMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK DIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRPH ASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELIC GQLGKATLGNGNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFS IGIDDVQPGKRLNDEKALTISGDYKKCDEEIQTFNEGKLKPKPGYDAAQT LEANVTAILNNIRDKTGKVCMKELHWRNSPLIMSQCGSKGSAINISQMIA CVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEF FFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGCI VQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIM PMLEEQLAKHDPAGVCSEAFKKSLKGFLKSQTNELDRVMKLVNNCAQKSE ILEKVGHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEP GTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKRISTPVITAELEFDDN PNIAQIVKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIILDAELYI DANIVKESILQTPKIKLKEQHVKVLDGRKLEVVPPADRSQIHFELHSLKN LLPLVVVKGIKTVERTVVYDKNKEKKNQKEEETTKHFQLLVEGMGLQAVM GIEGIDGRRTWSNHVMEMEQILGIEAARKCIIDEIAQTMEHHGMTIDRRH MMLLADVMTFRGEVLGITRFGIQKMDKSILMLASFERTADHLFNAAVNGR DDKIEGVTECIIMGIPMQIGTGILKVIQRVDPPPMLRYGPDPVLS* back to top
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