Tc03v2_t000810.1

Overview
NameTc03v2_t000810.1
Unique NameTc03v2_t000810.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length789
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 9 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Productcarbonic anhydrase 2
NoteBeta carbonic anhydrase 2, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18603900
GenbankXM_007036148.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g000810Tc03v2_g000810Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p000810.1Tc03v2_p000810.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto141829auto141829Theobroma cacaoexon
exon-auto141830auto141830Theobroma cacaoexon
exon-auto141831auto141831Theobroma cacaoexon
exon-auto141832auto141832Theobroma cacaoexon
exon-auto141833auto141833Theobroma cacaoexon
exon-auto141834auto141834Theobroma cacaoexon
exon-auto141835auto141835Theobroma cacaoexon
exon-auto141836auto141836Theobroma cacaoexon
exon-auto141837auto141837Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto141838auto141838Theobroma cacaoCDS
CDS-auto141839auto141839Theobroma cacaoCDS
CDS-auto141840auto141840Theobroma cacaoCDS
CDS-auto141841auto141841Theobroma cacaoCDS
CDS-auto141842auto141842Theobroma cacaoCDS
CDS-auto141843auto141843Theobroma cacaoCDS
CDS-auto141844auto141844Theobroma cacaoCDS
CDS-auto141845auto141845Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t000810.1 ID=Tc03v2_t000810.1|Name=Tc03v2_t000810.1|organism=Theobroma cacao|type=mRNA|length=789bp
ATGGAAATGGCAAAGCACTCTACTGAAGTGGTTGTTGCAGGACTGAAGAA
GATTCTCATCAGTGAGAAAGGCCTGGATCAGGAGGTTCAAGGAAAAGTTG
AGAAGCTTATTGCTGAGCTCCAAGGGACAAGACCTCCTCCACCCCCATGT
GACCCAGATGCTCAAAGGATTGAAGATGGCTTTGACTTCTTCAAGAAGAA
CATATATGACCAACATCCTGATTATTTCAGAGAACTTGCAGAGGGCCAAC
ACCCGAGGTTTTTGGTCTTTTCGTGCTCGGATTCCCGAGTAAGCCCCTCA
GTTGTTCTTAATTTCAAGCCAGGTGAAGCCTTCAGTGGCCGCAATATTGC
TAATATGGTTCCTCAATTTGACCAGCTGAGACACACCGAAATTGGTTCAG
TCATTGAATATGCTGTTAAAGCTCTTGAGGTAAAAAACATCCTGGTCATG
GGACATAGTCGTTGTGGTGGGATAGAGAGGCTTATGAAGCTTCCGGACGA
GAGTGTTACCTATGACTTCATAGATCAGTGGGTGCAAATTGGTTTGCCAG
CAAAGCTCAAGGTCCTGGCAGTGGCTAATGATCTGACATTTGAAGAACAA
TGCAGGCTGTGTGAAAAGGTATCAGTGAAGAACTCGATGGCAAATCTGCT
GACTTATCCATTTGTGAGAAATGCAGTGGTGAGTGGAACTCTGACATTGA
GGGGAGGTTATTATGATTTTGTGAATGGAACTTTTGAGCAGTGGAAGATG
TGTACAGAGCCAATGCCTCCAATGCCTATGCCCTTCTAA
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protein sequence of Tc03v2_p000810.1

>Tc03v2_p000810.1 ID=Tc03v2_p000810.1|Name=Tc03v2_p000810.1|organism=Theobroma cacao|type=polypeptide|length=263bp
MEMAKHSTEVVVAGLKKILISEKGLDQEVQGKVEKLIAELQGTRPPPPPC
DPDAQRIEDGFDFFKKNIYDQHPDYFRELAEGQHPRFLVFSCSDSRVSPS
VVLNFKPGEAFSGRNIANMVPQFDQLRHTEIGSVIEYAVKALEVKNILVM
GHSRCGGIERLMKLPDESVTYDFIDQWVQIGLPAKLKVLAVANDLTFEEQ
CRLCEKVSVKNSMANLLTYPFVRNAVVSGTLTLRGGYYDFVNGTFEQWKM
CTEPMPPMPMPF*
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