Tc03v2_t000340.1

Overview
NameTc03v2_t000340.1
Unique NameTc03v2_t000340.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1371
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
ProductUDP-glycosyltransferase 74B1
NotePutative UDP-glycosyltransferase 74B1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18603841
GenbankXM_007036053.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g000340Tc03v2_g000340Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p000340.1Tc03v2_p000340.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto140914auto140914Theobroma cacaoexon
exon-auto140915auto140915Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto140916auto140916Theobroma cacaoCDS
CDS-auto140917auto140917Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t000340.1 ID=Tc03v2_t000340.1|Name=Tc03v2_t000340.1|organism=Theobroma cacao|type=mRNA|length=1371bp
ATGCAAAACCAGAGAGTCCATGTCTTGGTGGTCGCATACCCTGCCCAAGG
CCACTTGAATCCCCTCATCCAGTTCGCTAAACGTTTAGCTTCCAAAGGAG
TCAAGGCCACAGTAGCAGCCACTCCCTACACCATCAATTCCATCCATCCA
AACAGTATTACCGTCGAACCAATCTCAGATGGCTTCGATGAAGGAGGCTT
CAAGCAAGCTCCAAGTGTAGAAGCCTACTTGGAGTCCTTCAAAACAGTTG
GATCAAGAACTTTGGCAGAGCTGATAGCGAAGTTCAACAACTCAGGGGAA
CCAGTTAGTTGCGTTGTCTATGATTCATTGCTGTTTTGGGCTGTTGATGT
AGCTAAAGAGTTTGGCATCCGTGCAGCTATGATGTTGACAAACTCAGCTT
CCGTGTGCTCTTTGTATTGGCAAATCAATCAAGGGCGCTTGGCTTTGCCT
TTGGACCAAGAAACTTTAGCAGCATCAGTGCCTGGCCTGCCTTCTCTGAG
CTTTTCCGACATGCCAAGTTTTCTTGCTCACCCTACAAGACAGTCTGCTT
ATTTAGCACTGATCATGGACAAAATCAGAACTCTGGGTAGAAATGATTGG
GTCTTCTGTAACTCCTTTGAAGAACTGGAAAGTGAGCTAGTCAAGGCTCT
GAAGGAACTTTGGCCTGTGATAACGATTGGCCCCTTGGTGCCATCATTCT
ACTTAGATCATCAAATTGAAGGAGATACAAGTTATGGGGCTAGCCTGTGG
AAGCAAAATAATGACCAGTGCCTGCGATGGCTAGACTCAAAACCATTGAG
ATCGGTGGTGTATGTATCATTTGGAAGCATGGCAAGCATCTCAACCAGAC
AATTTGAAGAAATAGCATGGGGCTTGAAAGCAAGCAATATGCCCTTCCTG
TGGGTTACAAAGGAGTTTGAAGACAAGCTGCTGCTTGAGTCCATCGACTC
AGTTGGAGAAAGAGGGCTATTCGTTACATGGTGCAACCAGCTAGAGGTGC
TGGCTCACCAAGCCGTGGGCTGCTTTGTAACACATTGCGGATGGAACTCA
ACGTTGGAGGGTTTGAGCCTAGGCGTGCCAATGGTGTGTGTGCCACAGTG
GAGTGACCAGCCAACGAATGCTAAGTTTGTAGAAGATGTGTGGATGGTAG
GAGTGAGAGCTAAAAAGGATGAAGAAGGGATTGTGAGGAGGGAAGAACTA
GGGAAGTGTTTAAGGGAAGTCATGGTTGGAGAAAAAACTCGGGAGATTAA
GAGTAGTGCATCAAAGTGGAGGGAGCATGCTAAGACAGCCGTTAGTGTAG
GTGGGAGCTCAGATAGGAATATAGATGAGTTTATCCGAAAGCTGCTGACG
GCTAAGGAGAAGAAAGCATGA
back to top

protein sequence of Tc03v2_p000340.1

>Tc03v2_p000340.1 ID=Tc03v2_p000340.1|Name=Tc03v2_p000340.1|organism=Theobroma cacao|type=polypeptide|length=457bp
MQNQRVHVLVVAYPAQGHLNPLIQFAKRLASKGVKATVAATPYTINSIHP
NSITVEPISDGFDEGGFKQAPSVEAYLESFKTVGSRTLAELIAKFNNSGE
PVSCVVYDSLLFWAVDVAKEFGIRAAMMLTNSASVCSLYWQINQGRLALP
LDQETLAASVPGLPSLSFSDMPSFLAHPTRQSAYLALIMDKIRTLGRNDW
VFCNSFEELESELVKALKELWPVITIGPLVPSFYLDHQIEGDTSYGASLW
KQNNDQCLRWLDSKPLRSVVYVSFGSMASISTRQFEEIAWGLKASNMPFL
WVTKEFEDKLLLESIDSVGERGLFVTWCNQLEVLAHQAVGCFVTHCGWNS
TLEGLSLGVPMVCVPQWSDQPTNAKFVEDVWMVGVRAKKDEEGIVRREEL
GKCLREVMVGEKTREIKSSASKWREHAKTAVSVGGSSDRNIDEFIRKLLT
AKEKKA*
back to top