Tc02v2_t029050.1

Overview
NameTc02v2_t029050.1
Unique NameTc02v2_t029050.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1413
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Productuncharacterized LOC18610311, transcript variant X1
NoteGlycosyltransferase family 61 protein, putative
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610311
GenbankXM_018115109.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g029050Tc02v2_g029050Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p029050.1Tc02v2_p029050.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto135204auto135204Theobroma cacaoexon
exon-auto135205auto135205Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto135206auto135206Theobroma cacaoCDS
CDS-auto135207auto135207Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t029050.1 ID=Tc02v2_t029050.1|Name=Tc02v2_t029050.1|organism=Theobroma cacao|type=mRNA|length=1413bp
ATGATTCCGATGAAGAGGAGAAACTCAGCGGCTACGCTGATCGTGTGCCT
GGCTCTCTTTGCGTTTTTCTTTGTATTTGAGATCAACCTGTCTTCCATTT
TCAGATTGATTGCAACTCGTTCGACCGGTATTCAAGAATCGGAACGTTTG
GAACTGAAACCAATGAGAACGCAGGAACCGTTAATAAAAGCAATAGGCAA
AGAGGCCCGGCCGCTTCAGCAATCCCCTCCACAGAGACAAATTATCAGCT
GCGACCGTTCCCATAGAGAATATGATCTCTGTTCGATAAACGGCCCCACT
GTCGTGGACCCCAACACCTCTACATTCTTCCTCATGGACCCCACCACATC
CAGTCCACAGTCCACGGTGGAGAAAATCAAGCCCTATCCAAGAAAATGGG
AGAATTTTCCAATGGCGAGAATCAAAGAGCTGACCATCACATCGAGCCCA
TCGGGCCCACGATGCAAGGTCCGACATAAGGCCCCGGCCATTGTATTCAG
TGCGGGAGGGTACACGGGAAACGTTTTCCATGATTTCAATGATGGATTCA
TCCCACTTTTCATCACCGTCGACTCCATCTATCAGAAACAAGATGTCATC
CTTGTGATATCTGAGGCACGTGATTGGTGGGTAAGCAAGTACAGAAATTT
GCTTGATGTTTTCAGCACACACAAAATAGTAAGCCTGGACAATGACACTT
CCACGCACTGTTTTCCTTCTGCCACACTAGGCCTCATATCATATGGTTTC
ATGGCATTAATGCCAAACTCGTCACAAACATTACTTCATTTCCGTGCCCT
CCTAGACCAAGCATTTGGTCATGGCAAGAACAACCCTTACTCCATCTCTA
ATGAATTTTTGAAATTCAGTAGGAAGCCGAGACTCGTGTTTATCAACCGA
CTGAGAGGCCAAGGACGAGAAATTTTGAACAAAGATGAAGCAAAGCGAGT
AGCGGAGGAGATCGGGTTTGATGTCATTTCGTTTGAGCCAACGGATAGGA
CTTCGTTGGACCAAGTTTATGCATTGCTAAATTCTAGCCATGCAATGGTT
GGGATGCACGGGGCAGCACTTACACACTTGTTGTTCCTCCGGCCGGGGTC
GGTGCTGGTGCAAGTGATGCCGCTAGGGACTAATTGGGCGGGGAAGATGT
GCCATGGGGAACCAGCTAGGGCGATGGGGATAGAGTACATGGAATACAAG
ATTGATGTAAAGGAGAGTAGCCTAGTGGAGAAGTATGACAAGGATGACAT
GGTGATTAAGGACCCAGCTGGTCTTCAAGGAAAGAAGTGGTCGCTTGATG
TTATGAAAATATATTTGAAGGAACAAAATGTTAAACTAGATTTGGTTAGG
TTTAGGGAATGTCTGAAGGAAGCTTATAGGAAAGCCAAGGTGTTCATGGA
GAAAGAGGGATGA
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protein sequence of Tc02v2_p029050.1

>Tc02v2_p029050.1 ID=Tc02v2_p029050.1|Name=Tc02v2_p029050.1|organism=Theobroma cacao|type=polypeptide|length=471bp
MIPMKRRNSAATLIVCLALFAFFFVFEINLSSIFRLIATRSTGIQESERL
ELKPMRTQEPLIKAIGKEARPLQQSPPQRQIISCDRSHREYDLCSINGPT
VVDPNTSTFFLMDPTTSSPQSTVEKIKPYPRKWENFPMARIKELTITSSP
SGPRCKVRHKAPAIVFSAGGYTGNVFHDFNDGFIPLFITVDSIYQKQDVI
LVISEARDWWVSKYRNLLDVFSTHKIVSLDNDTSTHCFPSATLGLISYGF
MALMPNSSQTLLHFRALLDQAFGHGKNNPYSISNEFLKFSRKPRLVFINR
LRGQGREILNKDEAKRVAEEIGFDVISFEPTDRTSLDQVYALLNSSHAMV
GMHGAALTHLLFLRPGSVLVQVMPLGTNWAGKMCHGEPARAMGIEYMEYK
IDVKESSLVEKYDKDDMVIKDPAGLQGKKWSLDVMKIYLKEQNVKLDLVR
FRECLKEAYRKAKVFMEKEG*
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