Tc02v2_t028750.1

Overview
NameTc02v2_t028750.1
Unique NameTc02v2_t028750.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1521
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 94 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Productbeta-glucosidase 40
NoteBeta-glucosidase 40
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610279
GenbankXM_007045845.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g028750Tc02v2_g028750Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p028750.1Tc02v2_p028750.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto134797auto134797Theobroma cacaoexon
exon-auto134798auto134798Theobroma cacaoexon
exon-auto134799auto134799Theobroma cacaoexon
exon-auto134800auto134800Theobroma cacaoexon
exon-auto134801auto134801Theobroma cacaoexon
exon-auto134802auto134802Theobroma cacaoexon
exon-auto134803auto134803Theobroma cacaoexon
exon-auto134804auto134804Theobroma cacaoexon
exon-auto134805auto134805Theobroma cacaoexon
exon-auto134806auto134806Theobroma cacaoexon
exon-auto134807auto134807Theobroma cacaoexon
exon-auto134808auto134808Theobroma cacaoexon
exon-auto134809auto134809Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto134810auto134810Theobroma cacaoCDS
CDS-auto134811auto134811Theobroma cacaoCDS
CDS-auto134812auto134812Theobroma cacaoCDS
CDS-auto134813auto134813Theobroma cacaoCDS
CDS-auto134814auto134814Theobroma cacaoCDS
CDS-auto134815auto134815Theobroma cacaoCDS
CDS-auto134816auto134816Theobroma cacaoCDS
CDS-auto134817auto134817Theobroma cacaoCDS
CDS-auto134818auto134818Theobroma cacaoCDS
CDS-auto134819auto134819Theobroma cacaoCDS
CDS-auto134820auto134820Theobroma cacaoCDS
CDS-auto134821auto134821Theobroma cacaoCDS
CDS-auto134822auto134822Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t028750.1 ID=Tc02v2_t028750.1|Name=Tc02v2_t028750.1|organism=Theobroma cacao|type=mRNA|length=1521bp
ATGCGGTCGAGAAAAAGCATTGCTTTGTTTATAGTATTGGTGGTTTTGGG
GATATTCCAGGCAGGCTTGTCACAGTCACAGAACATTAGCAGGGCCAGTT
TCCCAAAGGGCTTTGTTTTTGGAACCGCCTCTTCTTCTTTCCAGTACGAA
GGAGCAGTGAAGGAGGATGGAAGGGGGCCAACTATTTGGGACAAATTCTC
ACATACTTTTGGGAAGATAATCGATGGTAGTAATGCTGATGTTGCTGTGG
ATCAGTACCACCGCTATACTGAAGATATACGACTTATGAAGGACATGGGG
ATGGATGCTTACCGGTTTTCAATAGCTTGGTCTCGGATATTCCCTAATGG
TACAGGAGAAATAAACCAGGCAGGTGTCGATCATTACAATAATTTGATAA
ATGTTCTACTTGCCAAAGGTATTGAACCATATGTGACCCTTTACCACTGG
GATCTTCCTCAAGCGTTGGAGGATAGATACAATGGATGGCTCAACCCGCA
AATTATAAAGGACTTTGCAATGTTTGCTGAGACATGCTTCCAGATATTTG
GTGACAGGGTGAAACACTGGATTACATTTAATGAACCCCATACATTTACT
GTTCAAGGCTATGATGTCGGTCTCCAAGCACCAGGACGTTGTTCCATCAT
TCTTCGCCTTATCTGCAAGGCTGGAAACTCTGCAACTGAGCCTTACATAG
TTGCCCACAATGTTCTCCTTTCTCATGCAACCGTTGCAGATATTTACAGG
AAAAAGTACAAGGCAAAACAACATGGATCAGTTGGGGTATCGTTTGATGT
TATGTGGTATGAACCAGAGACAAATTCAACAGAAAACACTGAAGCCGCTC
AAAGAGCCCAAGATTTTCAGCTTGGCTGGTTTCTGGACCCATTGATCTTT
GGACATTATCCAAGCTCAATGATTAGCAGAGTAGGAAACCGATTGCCAAG
GTTTTCAAAAGCTGAGTCCGCTCTTCTTAAGGGGTCTTTGGATTTTGTTG
GCATTAATCATTACACTACATATTATGCTAGAGCAAATGCCACTAATGCA
CTTGGTACTATACTAAATGACTCCATAGCAGACTCTGGTGCCTTTACAGT
TCCTTTCAAAAATGGGAAACCTATAGGAGAGAAGGCAAATTCTATATGGT
TATACATAGTACCCAGTGGTATGAGAAGCCTAATGAATTACATCAAGGAG
AAGTATGGAAATCCTCCAGTCATTATCACAGAAAATGGTATGGATGACTC
AAATAGCATATTTAACAGCATTAAAGATGCTCTGAAGGATGAGAAGAGAA
TCAAATACCACAATGATTACTTAACTAACCTGCTAGCTGCTATCAAGGAA
GATGGTTGCAATGTTAAAGGGTATTTTGTCTGGTCTCTACTTGATAACTG
GGAGTGGGGAGCCGGATACACATCAAGATTCGGTCTATATTTTGTGGACT
ACAAGGACAACCTCAAGAGATACGCCAAGGACTCTGTTCAATGGTTCAAG
AACTTCCTAGCGTCTGCTTAA
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protein sequence of Tc02v2_p028750.1

>Tc02v2_p028750.1 ID=Tc02v2_p028750.1|Name=Tc02v2_p028750.1|organism=Theobroma cacao|type=polypeptide|length=507bp
MRSRKSIALFIVLVVLGIFQAGLSQSQNISRASFPKGFVFGTASSSFQYE
GAVKEDGRGPTIWDKFSHTFGKIIDGSNADVAVDQYHRYTEDIRLMKDMG
MDAYRFSIAWSRIFPNGTGEINQAGVDHYNNLINVLLAKGIEPYVTLYHW
DLPQALEDRYNGWLNPQIIKDFAMFAETCFQIFGDRVKHWITFNEPHTFT
VQGYDVGLQAPGRCSIILRLICKAGNSATEPYIVAHNVLLSHATVADIYR
KKYKAKQHGSVGVSFDVMWYEPETNSTENTEAAQRAQDFQLGWFLDPLIF
GHYPSSMISRVGNRLPRFSKAESALLKGSLDFVGINHYTTYYARANATNA
LGTILNDSIADSGAFTVPFKNGKPIGEKANSIWLYIVPSGMRSLMNYIKE
KYGNPPVIITENGMDDSNSIFNSIKDALKDEKRIKYHNDYLTNLLAAIKE
DGCNVKGYFVWSLLDNWEWGAGYTSRFGLYFVDYKDNLKRYAKDSVQWFK
NFLASA*
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