Tc02v2_t028680.2

Overview
NameTc02v2_t028680.2
Unique NameTc02v2_t028680.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length798
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 6 ESTs, 98 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Product14-3-3-like protein GF14 iota, transcript variant X1
Note14-3-3-like protein GF14 iota
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610273
GenbankXM_018115628.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g028680Tc02v2_g028680Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p028680.2Tc02v2_p028680.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto134675auto134675Theobroma cacaoexon
exon-auto134676auto134676Theobroma cacaoexon
exon-auto134677auto134677Theobroma cacaoexon
exon-auto134678auto134678Theobroma cacaoexon
exon-auto134679auto134679Theobroma cacaoexon
exon-auto134680auto134680Theobroma cacaoexon
exon-auto134681auto134681Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto134682auto134682Theobroma cacaoCDS
CDS-auto134683auto134683Theobroma cacaoCDS
CDS-auto134684auto134684Theobroma cacaoCDS
CDS-auto134685auto134685Theobroma cacaoCDS
CDS-auto134686auto134686Theobroma cacaoCDS
CDS-auto134687auto134687Theobroma cacaoCDS
CDS-auto134688auto134688Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t028680.2 ID=Tc02v2_t028680.2|Name=Tc02v2_t028680.2|organism=Theobroma cacao|type=mRNA|length=798bp
ATGTCTAATACAGAGAAGGAGAGAGAGACTCATGTTTACATGGCCAAACT
CGCCGAACAAGCCGAACGTTACGAAGAAATGGTGGAGACTATGAAACAAG
TAGCGAAACTCGGTTGCGAGCTGACAGTGGAAGAAAGGAACCTTCTGTCC
GTGGGATACAAGAACGTGATCGGTGCGCGGAGAGCTTCGTGGCGGATCAT
GTCTTCGATCGAACAGAAGGAGGAGTCGAAGGGGAATGAAGAGAATGTCA
AGCTGATCAAAGGGTACCGCCAAAAGGTTGAGGAAGAGCTCTCCAAGATC
TGCACTGACATTTTGGGCATCATTGACAAGCATCTCATCCCTTCTTCTAA
CTCTGGTGAAGCCACTGTTTTTTACTACAAGATGAAAGGTGATTACTACC
GGTATGTTGCTGAGTTCAAGACAGATCAGGAGAGGAAAGAGGCTGCTGAG
CAGTCATTGAAAGGCTATGAGGCTGCTTCTGCCGCTGCAAACACAGATCT
TCCTTCAACTCACCCAATTCGTCTTGGCCTTGCCCTTAACTTCTCTGTCT
TTCATTATGAGATAATGAATTCTCCCGAGAGGGCCTGCCATTTGGCAAAG
CAAGCCTTTGATGAGGCAATTTCAGAGTTGGACACTTTAAGTGAAGAGTC
ATACAAGGATAGCACCCTAATCATGCAGCTGCTGAGAGACAACCTCACCC
TGTGGACTTCTGATTTGCCTGAAGATGGAGGTGAAGATAGCGTAAAAGGT
GAAGATGGTAAATCTACTGCAGAAGCTGAGGTAAAAGGCGAGAAATGA
back to top

protein sequence of Tc02v2_p028680.2

>Tc02v2_p028680.2 ID=Tc02v2_p028680.2|Name=Tc02v2_p028680.2|organism=Theobroma cacao|type=polypeptide|length=266bp
MSNTEKERETHVYMAKLAEQAERYEEMVETMKQVAKLGCELTVEERNLLS
VGYKNVIGARRASWRIMSSIEQKEESKGNEENVKLIKGYRQKVEEELSKI
CTDILGIIDKHLIPSSNSGEATVFYYKMKGDYYRYVAEFKTDQERKEAAE
QSLKGYEAASAAANTDLPSTHPIRLGLALNFSVFHYEIMNSPERACHLAK
QAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDSVKG
EDGKSTAEAEVKGEK*
back to top