Tc02v2_t028680.1

Overview
NameTc02v2_t028680.1
Unique NameTc02v2_t028680.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length786
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 7 ESTs, 98 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Product14-3-3-like protein GF14 iota, transcript variant X2
Note14-3-3-like protein GF14 iota
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610273
GenbankXM_007045832.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g028680Tc02v2_g028680Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p028680.1Tc02v2_p028680.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto134659auto134659Theobroma cacaoexon
exon-auto134660auto134660Theobroma cacaoexon
exon-auto134661auto134661Theobroma cacaoexon
exon-auto134662auto134662Theobroma cacaoexon
exon-auto134663auto134663Theobroma cacaoexon
exon-auto134664auto134664Theobroma cacaoexon
exon-auto134665auto134665Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto134666auto134666Theobroma cacaoCDS
CDS-auto134667auto134667Theobroma cacaoCDS
CDS-auto134668auto134668Theobroma cacaoCDS
CDS-auto134669auto134669Theobroma cacaoCDS
CDS-auto134670auto134670Theobroma cacaoCDS
CDS-auto134671auto134671Theobroma cacaoCDS
CDS-auto134672auto134672Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t028680.1 ID=Tc02v2_t028680.1|Name=Tc02v2_t028680.1|organism=Theobroma cacao|type=mRNA|length=786bp
ATGTCTAATACAGAGAAGGAGAGAGAGACTCATGTTTACATGGCCAAACT
CGCCGAACAAGCCGAACGTTACGAAGAAATGGTGGAGACTATGAAACAAG
TAGCGAAACTCGGTTGCGAGCTGACAGTGGAAGAAAGGAACCTTCTGTCC
GTGGGATACAAGAACGTGATCGGTGCGCGGAGAGCTTCGTGGCGGATCAT
GTCTTCGATCGAACAGAAGGAGGAGTCGAAGGGGAATGAAGAGAATGTCA
AGCTGATCAAAGGGTACCGCCAAAAGGTTGAGGAAGAGCTCTCCAAGATC
TGCACTGACATTTTGGGCATCATTGACAAGCATCTCATCCCTTCTTCTAA
CTCTGGTGAAGCCACTGTTTTTTACTACAAGATGAAAGGTGATTACTACC
GGTATGTTGCTGAGTTCAAGACAGATCAGGAGAGGAAAGAGGCTGCTGAG
CAGTCATTGAAAGGCTATGAGGCTGCTTCTGCCGCTGCAAACACAGATCT
TCCTTCAACTCACCCAATTCGTCTTGGCCTTGCCCTTAACTTCTCTGTCT
TTCATTATGAGATAATGAATTCTCCCGAGAGGGCCTGCCATTTGGCAAAG
CAAGCCTTTGATGAGGCAATTTCAGAGTTGGACACTTTAAGTGAAGAGTC
ATACAAGGATAGCACCCTAATCATGCAGCTGCTGAGAGACAACCTCACCC
TGTGGACTTCTGATTTGCCTGAAGATGGAGGTGAAGATAGCGTAAAAGGT
GAAGATGGTAAATCTACTGCAGAAGCTGAGAAATGA
back to top

protein sequence of Tc02v2_p028680.1

>Tc02v2_p028680.1 ID=Tc02v2_p028680.1|Name=Tc02v2_p028680.1|organism=Theobroma cacao|type=polypeptide|length=262bp
MSNTEKERETHVYMAKLAEQAERYEEMVETMKQVAKLGCELTVEERNLLS
VGYKNVIGARRASWRIMSSIEQKEESKGNEENVKLIKGYRQKVEEELSKI
CTDILGIIDKHLIPSSNSGEATVFYYKMKGDYYRYVAEFKTDQERKEAAE
QSLKGYEAASAAANTDLPSTHPIRLGLALNFSVFHYEIMNSPERACHLAK
QAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDSVKG
EDGKSTAEAEK*
back to top