Tc02v2_t028320.2

Overview
NameTc02v2_t028320.2
Unique NameTc02v2_t028320.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length801
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 6 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Productprobable 6-phosphogluconolactonase 1, transcript variant X2
NoteProbable 6-phosphogluconolactonase 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610229
GenbankXM_007045763.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g028320Tc02v2_g028320Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p028320.2Tc02v2_p028320.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto133646auto133646Theobroma cacaoexon
exon-auto133647auto133647Theobroma cacaoexon
exon-auto133648auto133648Theobroma cacaoexon
exon-auto133649auto133649Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto133650auto133650Theobroma cacaoCDS
CDS-auto133651auto133651Theobroma cacaoCDS
CDS-auto133652auto133652Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t028320.2 ID=Tc02v2_t028320.2|Name=Tc02v2_t028320.2|organism=Theobroma cacao|type=mRNA|length=801bp
ATGGCTCTTTCTGGGGATAATAATGATAGAGGAGAATTGAGGATTCATGA
AAATTTGGATGAGCTAAGGACGGATTTGGCTGACTATATTGCTGAGTTAT
CAGAGGCTGCGGTGAAGGAGCGGGGCGTCTTTGCTATTGCATTGTCCGGA
GGTTCTCTCATTGGCTTAATGGGAAAACTCTGTGAAGCTCCTTATAACAA
GACTGTAGACTGGGCTAAATGGTATATATTTTGGGCGGATGAACGTGTTG
TGGCAAAAAACCATTCTGATAGCAATTATAAGCTTGCAAAGGATGGCCTT
CTTTCAAAGGTGCCAATTGTTCCAAGTCATGTCCATTCTATCAATGATTC
AGTTTCAGCAGAGGAGGCTGCTGATGAATACATGTTTGTTATTCGGCAGT
TAGTGAAAACACGGATGGTAGGTGTTTCTGACATTAGTGACTGCCCGAAG
TTTGACCTTATCCTTCTTGGGATGGGCCCTGATGGTCACATTGCCTCGCT
ATTTCCTAATCATTCAGTGCTTGATGAGACAGACGAATGGGTAACTTTCA
TCACTGATTCCCCCAAACCACCACCTGAGAGGATAACATTCACTTTGCCT
GTCATCAATTCAGCGTCCAATGTAGCAATGGTTGTGACAGGTGAGAACAA
AGCAGAGGCTGTGCATTCGGCAATCGATAACATCGGACCTGACTGCCCGT
CACTGCCTGCACGGTTAGTCCAACCATCGAAAGGGAAGTTGATATGGTTT
CTGGACAAGCCAGCTGCATCAAAACTAGACGGCTTCCAATTCTCTGAGTA
G
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protein sequence of Tc02v2_p028320.2

>Tc02v2_p028320.2 ID=Tc02v2_p028320.2|Name=Tc02v2_p028320.2|organism=Theobroma cacao|type=polypeptide|length=267bp
MALSGDNNDRGELRIHENLDELRTDLADYIAELSEAAVKERGVFAIALSG
GSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKLAKDGL
LSKVPIVPSHVHSINDSVSAEEAADEYMFVIRQLVKTRMVGVSDISDCPK
FDLILLGMGPDGHIASLFPNHSVLDETDEWVTFITDSPKPPPERITFTLP
VINSASNVAMVVTGENKAEAVHSAIDNIGPDCPSLPARLVQPSKGKLIWF
LDKPAASKLDGFQFSE*
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