Tc02v2_t028320.1

Overview
NameTc02v2_t028320.1
Unique NameTc02v2_t028320.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length801
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 7 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productprobable 6-phosphogluconolactonase 1, transcript variant X1
NoteProbable 6-phosphogluconolactonase 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610229
GenbankXM_007045762.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g028320Tc02v2_g028320Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p028320.1Tc02v2_p028320.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto133637auto133637Theobroma cacaoexon
exon-auto133638auto133638Theobroma cacaoexon
exon-auto133639auto133639Theobroma cacaoexon
exon-auto133640auto133640Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto133641auto133641Theobroma cacaoCDS
CDS-auto133642auto133642Theobroma cacaoCDS
CDS-auto133643auto133643Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t028320.1 ID=Tc02v2_t028320.1|Name=Tc02v2_t028320.1|organism=Theobroma cacao|type=mRNA|length=801bp
ATGGCTCTTTCTGGGGATAATAATGATAGAGGAGAATTGAGGATTCATGA
AAATTTGGATGAGCTAAGGACGGATTTGGCTGACTATATTGCTGAGTTAT
CAGAGGCTGCGGTGAAGGAGCGGGGCGTCTTTGCTATTGCATTGTCCGGA
GGTTCTCTCATTGGCTTAATGGGAAAACTCTGTGAAGCTCCTTATAACAA
GACTGTAGACTGGGCTAAATGGTATATATTTTGGGCGGATGAACGTGTTG
TGGCAAAAAACCATTCTGATAGCAATTATAAGCTTGCAAAGGATGGCCTT
CTTTCAAAGGTGCCAATTGTTCCAAGTCATGTCCATTCTATCAATGATTC
AGTTTCAGCAGAGGAGGCTGCTGATGAATACATGTTTGTTATTCGGCAGT
TAGTGAAAACACGGATGGTAGGTGTTTCTGACATTAGTGACTGCCCGAAG
TTTGACCTTATCCTTCTTGGGATGGGCCCTGATGGTCACATTGCCTCGCT
ATTTCCTAATCATTCAGTGCTTGATGAGACAGACGAATGGGTAACTTTCA
TCACTGATTCCCCCAAACCACCACCTGAGAGGATAACATTCACTTTGCCT
GTCATCAATTCAGCGTCCAATGTAGCAATGGTTGTGACAGGTGAGAACAA
AGCAGAGGCTGTGCATTCGGCAATCGATAACATCGGACCTGACTGCCCGT
CACTGCCTGCACGGTTAGTCCAACCATCGAAAGGGAAGTTGATATGGTTT
CTGGACAAGCCAGCTGCATCAAAACTAGACGGCTTCCAATTCTCTGAGTA
G
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protein sequence of Tc02v2_p028320.1

>Tc02v2_p028320.1 ID=Tc02v2_p028320.1|Name=Tc02v2_p028320.1|organism=Theobroma cacao|type=polypeptide|length=267bp
MALSGDNNDRGELRIHENLDELRTDLADYIAELSEAAVKERGVFAIALSG
GSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKLAKDGL
LSKVPIVPSHVHSINDSVSAEEAADEYMFVIRQLVKTRMVGVSDISDCPK
FDLILLGMGPDGHIASLFPNHSVLDETDEWVTFITDSPKPPPERITFTLP
VINSASNVAMVVTGENKAEAVHSAIDNIGPDCPSLPARLVQPSKGKLIWF
LDKPAASKLDGFQFSE*
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