Tc02v2_t028220.1

Overview
NameTc02v2_t028220.1
Unique NameTc02v2_t028220.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1404
Properties
Property NameValue
NoteCytochrome P450 85A
Model evidenceSupporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productcytochrome P450 85A
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610219
GenbankXM_007045749.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g028220Tc02v2_g028220Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p028220.1Tc02v2_p028220.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto133449auto133449Theobroma cacaoexon
exon-auto133450auto133450Theobroma cacaoexon
exon-auto133451auto133451Theobroma cacaoexon
exon-auto133452auto133452Theobroma cacaoexon
exon-auto133453auto133453Theobroma cacaoexon
exon-auto133454auto133454Theobroma cacaoexon
exon-auto133455auto133455Theobroma cacaoexon
exon-auto133456auto133456Theobroma cacaoexon
exon-auto133457auto133457Theobroma cacaoexon
exon-auto133458auto133458Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto133459auto133459Theobroma cacaoCDS
CDS-auto133460auto133460Theobroma cacaoCDS
CDS-auto133461auto133461Theobroma cacaoCDS
CDS-auto133462auto133462Theobroma cacaoCDS
CDS-auto133463auto133463Theobroma cacaoCDS
CDS-auto133464auto133464Theobroma cacaoCDS
CDS-auto133465auto133465Theobroma cacaoCDS
CDS-auto133466auto133466Theobroma cacaoCDS
CDS-auto133467auto133467Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t028220.1 ID=Tc02v2_t028220.1|Name=Tc02v2_t028220.1|organism=Theobroma cacao|type=mRNA|length=1404bp
ATGGCATTCTTGGTGATGGTAGTGGCTTGTTGGCTTGCTTTGGGGTTCTG
TACCTGCTTTGCTATGTTGAAATGGAATGAGATAAGATATAGTAGAAGAA
AAGGCTTGCCTCCAGGGACTATGGGTTGGCCGGTTTTTGGTGAGACTACA
GAGTTCCTCAAACATGGACCAAATTTCATGAAAAAGCAGAGAGCAAGTTA
TGGAAGTTTATTCAAGACTCACATACTGGGGTGTCCAACTGTTGTTTCCA
TGGATCCTGAGCTCAACAGATACATCCTTATGAATGAAGGAAAAGGGCTT
GTACCTGGCTACCCTCAATCCATGCTTGATATACTAGGGAAATGCAACAT
TGCAGCCGTGCATGGTTCTGCTCACAAGCGCATAAGAGGGTCATTGCTGT
CTCTCATTGGCCCTCTCGTGATCAAAGACGAGCTGCTCCCAAAAATTGAC
AAGCTTATGAGATCTTTCCTTGAGAACTGGAATGGAGAAAGTACTATCGA
CATCCAAGAAAGAACCAATGAGATGGCGTTGTCCATATCCTTCAAGCAAA
TTCTTGAAAAGGAATCAACTTCGTTATATGAGATTTTCAAACCAGACTTT
GATAAGTTATTAGTAGGAACGCTATCACTGCCCATAAACATTCCAGGGAC
AAATTACCATCATGGGATCCAGGGAAGGAGAAGAATCATCAAGATGTTGA
AACGGATTATGGAGGAGAGAAGGGCCCTTTCGACAGTCTACGATGACATG
CTTCACCGCCTTCTAGATTGCAAAGACTCAAAGTACAATCTCAGCGACGA
GGAGATAATTGATCAAATAATTACTATCATGTACTCGGGTTATGAAACTG
TCTCGACTACTTCAATGATGGCCATCAAGTATCTCCATGATCATCCTAAA
GCCCTTCAAGAACTAAGAGAAGAGCATGTCAGTATCCGGGAAAAGAAAAA
GCCAGGGGAGGCAATCGACTGGAATGATTACAAGTCTATGAGTTTTACTC
GTGCTGTAATTTTTGAAACCTCAAGGTTAGCTACAATTGTTAATGGGGTA
TTGAGGAAGACAACAGAAGATATGGAAGTAAACGGATTTACCATTCCCAA
AGGGTGGAGAATATACGTTTACACAAGGGAAATTAACTATGATCCATTCC
TTTATCCAGAGCCTTTAACCTTCAATCCATGGAGATGGCTGGATAAGAAC
TTGGAGTCTCACAACTACTGCTTCCTATTTGGAGGAGGCAGCAGGCTGTG
TCCTGGAAAGGAATTGGGCATCATCCAAATTTCTACTTTCCTTCACTATT
TTGTTACCAGTTACAGGTGGGAGGAAGCTGGTACAAATGAAATCCAGCAA
TTCCCAAGAGTCGAAGCACCCAAGGGACTGCACATTAGGGTATCAAAGTA
CTGA
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protein sequence of Tc02v2_p028220.1

>Tc02v2_p028220.1 ID=Tc02v2_p028220.1|Name=Tc02v2_p028220.1|organism=Theobroma cacao|type=polypeptide|length=468bp
MAFLVMVVACWLALGFCTCFAMLKWNEIRYSRRKGLPPGTMGWPVFGETT
EFLKHGPNFMKKQRASYGSLFKTHILGCPTVVSMDPELNRYILMNEGKGL
VPGYPQSMLDILGKCNIAAVHGSAHKRIRGSLLSLIGPLVIKDELLPKID
KLMRSFLENWNGESTIDIQERTNEMALSISFKQILEKESTSLYEIFKPDF
DKLLVGTLSLPINIPGTNYHHGIQGRRRIIKMLKRIMEERRALSTVYDDM
LHRLLDCKDSKYNLSDEEIIDQIITIMYSGYETVSTTSMMAIKYLHDHPK
ALQELREEHVSIREKKKPGEAIDWNDYKSMSFTRAVIFETSRLATIVNGV
LRKTTEDMEVNGFTIPKGWRIYVYTREINYDPFLYPEPLTFNPWRWLDKN
LESHNYCFLFGGGSRLCPGKELGIIQISTFLHYFVTSYRWEEAGTNEIQQ
FPRVEAPKGLHIRVSKY*
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