Tc02v2_t028010.1

Overview
NameTc02v2_t028010.1
Unique NameTc02v2_t028010.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1560
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 83 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
Productcytochrome P450 CYP749A22
NoteCytochrome P450 CYP749A22
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610189
GenbankXM_007045713.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g028010Tc02v2_g028010Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p028010.1Tc02v2_p028010.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto133052auto133052Theobroma cacaoexon
exon-auto133053auto133053Theobroma cacaoexon
exon-auto133054auto133054Theobroma cacaoexon
exon-auto133055auto133055Theobroma cacaoexon
exon-auto133056auto133056Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto133057auto133057Theobroma cacaoCDS
CDS-auto133058auto133058Theobroma cacaoCDS
CDS-auto133059auto133059Theobroma cacaoCDS
CDS-auto133060auto133060Theobroma cacaoCDS
CDS-auto133061auto133061Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t028010.1 ID=Tc02v2_t028010.1|Name=Tc02v2_t028010.1|organism=Theobroma cacao|type=mRNA|length=1560bp
ATGAACTCCATGGGAAAGCTTTTAATCCTTGTCGCAGGTTCATTCTTCCT
TTACTTCCTCCGAGCTCTGCTCAAGGCCTTCTACAACTACTGGTGGATTC
CCCACCGGATACAGAATATACTGAGGTCACAGGGAATTAAAGGACCTCCG
TATGAGTTTATCCATGGAAACAACAAAGCAGTTGTCGAAAGTATAAGGGA
AGCATCAAGCAAACCTATGGCCTTGACACATGATATATTTCCCAGAGTGC
TGCCTCATATTTACTCCTGCATCAACACATATGGGAAAATTTATCTTAGT
TGGAATGGAGTTCGAGCTCTGCTGGTAATTACAGAACCAGATCTCATCAA
AGAGGTGCTGAAAAATAGTGAAAAAGCTTTTCCAAAGAGGAAAGTTACAT
ATTTCCTTAGCAAGATACTGGGGGACGGGCTTGCTACGACCGTAAGAGAA
AAATGGGCAAGGCAAAGGAAATTGGCCAATTATGCTTTTCATGGGGAGAG
CTTGAAAAACATGACTCCAGCAGTAATTGCTAGCGTTGAAACAATGCTAC
AGAAGTGGAAAGGCCAGGAAGGGAAGGAGATCGAAGTGTTCCAGGAATTT
AGATTATTGACTTCAGAAGTGATATCCAGAACAGCTTTTGGTAGCAGTTA
CCTGGAGGGCGAGAAGATTTTTGAGACGTTGATGAAGTTGTCAGTAATCG
CAAGCAGAAATCTTTATAAAGCCAGGATACCTGGCATCAGCTACGTCTGG
AAACATGCTGATGAAATTGAATCGGAGAAACTTGCAAAAGAAATACATGA
TTCTGTGATGAAGATTGTTAAACAAAGAGAAGAGAAAGTAGTGGCTGGAG
AAGCTGAGAGCTTTGGCAGTGATTTTCTGGGATTACTTCTAAATGCCTAT
CATGACTTGGACGAGAAAAACAGGCTCTCCGTTGAAGATTTGGTAGATGA
GTGTAAAACATTCTACTTTGCTGGACAAGAAACAACTAATTCCTTGCTCG
CATGGACAGTCCTGCTTTTAGCAATCCATACAGATTGGCAAGAGAAAGCA
AGAAGAGAGGTGATTGAGGTATTTGGTAATCAAGATCCACATCCTGAAGG
GATTGCCAAACTAAAAACTATGACCATGATCATCAATGAAACTTTACGAT
TGTATCCTCCTGTAAATGGCATCGCAAGGAGAGTTGGAAGAGAAGTTCAA
TTGGGAAAGCTCATGCTGCCTACAAATATAGAGTTCAGCATCCCGAACAT
GGCACTTCACCATGACCCTGAATTATGGGGAGATGATGTTCATCTTTTCA
AACCAGAGAGATTCGCTGAAGGGATTGCCAAGGCTACCAAACACAATGCG
GGTGCATTTATTCCCTTTGGAATGGGACCTCGATCTTGCGTGGGCATGAG
CTTTGCGATCACAGAAACAAAGATGGCTATCTTCATGATTCTGCAACGCT
ACAACATTGCCCTCTCCCCTGCCTATGTCCACGCACCCTTAGCTCTTCTC
ACACTTAGGCCACAACATGGAATTCAGTTGTTGTTTCATTCACTGCCTAA
TGATGCTTAA
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protein sequence of Tc02v2_p028010.1

>Tc02v2_p028010.1 ID=Tc02v2_p028010.1|Name=Tc02v2_p028010.1|organism=Theobroma cacao|type=polypeptide|length=520bp
MNSMGKLLILVAGSFFLYFLRALLKAFYNYWWIPHRIQNILRSQGIKGPP
YEFIHGNNKAVVESIREASSKPMALTHDIFPRVLPHIYSCINTYGKIYLS
WNGVRALLVITEPDLIKEVLKNSEKAFPKRKVTYFLSKILGDGLATTVRE
KWARQRKLANYAFHGESLKNMTPAVIASVETMLQKWKGQEGKEIEVFQEF
RLLTSEVISRTAFGSSYLEGEKIFETLMKLSVIASRNLYKARIPGISYVW
KHADEIESEKLAKEIHDSVMKIVKQREEKVVAGEAESFGSDFLGLLLNAY
HDLDEKNRLSVEDLVDECKTFYFAGQETTNSLLAWTVLLLAIHTDWQEKA
RREVIEVFGNQDPHPEGIAKLKTMTMIINETLRLYPPVNGIARRVGREVQ
LGKLMLPTNIEFSIPNMALHHDPELWGDDVHLFKPERFAEGIAKATKHNA
GAFIPFGMGPRSCVGMSFAITETKMAIFMILQRYNIALSPAYVHAPLALL
TLRPQHGIQLLFHSLPNDA*
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