Tc02v2_t027440.2

Overview
NameTc02v2_t027440.2
Unique NameTc02v2_t027440.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1458
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 5 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Product6-phosphogluconate dehydrogenase, decarboxylating 3, transcript variant X1
Note6-phosphogluconate dehydrogenase, decarboxylating 3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610129
GenbankXM_007045622.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g027440Tc02v2_g027440Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p027440.2Tc02v2_p027440.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto132026auto132026Theobroma cacaoexon
exon-auto132027auto132027Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto132028auto132028Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t027440.2 ID=Tc02v2_t027440.2|Name=Tc02v2_t027440.2|organism=Theobroma cacao|type=mRNA|length=1458bp
ATGGTCGGCCTTACTAGAATTGGCCTTGCTGGCCTTGCTGTCATGGGCCA
AAATCTCGCCCTAAACATTGCTGAGAAGGGATTCCCAATCTCTGTTTACA
ACCGGACCACTTCAAAAGTTGATGAGACAGTTGAAAGAGCTAAACAGGAA
GGGAATCTTCCTTTATATGGATTTCATGATCCAGAATCGTTTGTTCATTC
TATCCAGAAACCTCGTGTCATAATTATGCTTGTGAAGGCTGGACCTCCTG
TTGATCAAACCATTAAAACTTTATCAGTTTACTTGGAGAAAGGGGATTGT
ATCATTGATGGAGGTAATGAGTGGTACGAAAACACTGAGAGAAGAGAGAA
AGCCATGGCAGAATTAGGGCTGCTTTACCTTGGAATGGGAGTTTCTGGTG
GTGAAGAAGGTGCTAGGCATGGACCTTCTTTGATGCCTGGAGGTTCCTAT
GAGGCTTATAAATATATAGAAGATATCCTTCTTAAGGTGGCTGCTCAGGT
TCCTGACAGTGGTCCTTGTGTCACTTATGTTGGCAAAGGAGGATCTGGAA
ATTTTGTTAAGATGGTTCACAATGGGATTGAATATGGTGATATGCAGCTG
ATTGCAGAGGCCTATGATGTACTGAAATCAGTTGGGAAGCTCTCTAATGA
AGAATTACACCAGGTTTTCTCAGAGTGGAACAAGGGGGAACTGCTGAGCT
TCTTAATAGAGATCACTGCTGATATATTTGGAATTAAGGATGACAAAGGA
GAAGGATATCTGGTAGACAAGGTTTTGGATAAAACCGGCATGAAGGGTAC
TGGTAAGTGGACAGTTCAGCAAGCTGCAGAGTTGTCTATTGCTGCTCCTA
CAATGGCATCATCCCTGGATGCGAGATTCCTTAGTGGTTTGAAGGAGGAG
AGAGTTGAAGCTGCCAAGATTTTCACATCCAGGGGCTTTAGTAACATTCT
GGCTGACGTAGCTGTTGATAAGAAAAAGTTAATTGATGATGTGAGACAAG
CTCTATATGCATCTAAAATATGTAGCTATGCTCAAGGAATGAACTTGATA
CGTGCAAAGAGTATTGAGAAGGGGTGGGGCTTGAAACTTGGGGAGCTAGC
TCGGATCTGGAAGGGGGGTTGCATCATTCGTGCTGTTTTCTTGGACCGTA
TAAAGAAGGCCTATGATAGAAACCCAGACCTGGCAAATCTTCTTGTTGAT
CCGGAGTTTGCTAAGGAGATTATAGAGCGACAGTCTGCTTGGCGAAGAGT
TGTTTCCCTTGCTATCAATTCAGGTATTAGCACTCCTGGTATGTCCTCTA
GCCTTGCTTATTTTGACTCGTACCGCAGGGAAAGGCTGCCTGCTAATTTA
GTTCAGGCTCAGAGAGATTACTTTGGAGCTCATACTTATGAGAGGATTGA
TGTCTCAGGATCCTTCCACACTGAATGGTTCAAGATTGCTAAACAGTCAA
AAATCTAA
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protein sequence of Tc02v2_p027440.2

>Tc02v2_p027440.2 ID=Tc02v2_p027440.2|Name=Tc02v2_p027440.2|organism=Theobroma cacao|type=polypeptide|length=486bp
MVGLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQE
GNLPLYGFHDPESFVHSIQKPRVIIMLVKAGPPVDQTIKTLSVYLEKGDC
IIDGGNEWYENTERREKAMAELGLLYLGMGVSGGEEGARHGPSLMPGGSY
EAYKYIEDILLKVAAQVPDSGPCVTYVGKGGSGNFVKMVHNGIEYGDMQL
IAEAYDVLKSVGKLSNEELHQVFSEWNKGELLSFLIEITADIFGIKDDKG
EGYLVDKVLDKTGMKGTGKWTVQQAAELSIAAPTMASSLDARFLSGLKEE
RVEAAKIFTSRGFSNILADVAVDKKKLIDDVRQALYASKICSYAQGMNLI
RAKSIEKGWGLKLGELARIWKGGCIIRAVFLDRIKKAYDRNPDLANLLVD
PEFAKEIIERQSAWRRVVSLAINSGISTPGMSSSLAYFDSYRRERLPANL
VQAQRDYFGAHTYERIDVSGSFHTEWFKIAKQSKI*
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