Tc02v2_t027160.1

Overview
NameTc02v2_t027160.1
Unique NameTc02v2_t027160.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1170
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productcholine/ethanolaminephosphotransferase 1, transcript variant X2
NoteCholine/ethanolaminephosphotransferase 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610102
GenbankXM_018116288.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g027160Tc02v2_g027160Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p027160.1Tc02v2_p027160.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto131411auto131411Theobroma cacaoexon
exon-auto131412auto131412Theobroma cacaoexon
exon-auto131413auto131413Theobroma cacaoexon
exon-auto131414auto131414Theobroma cacaoexon
exon-auto131415auto131415Theobroma cacaoexon
exon-auto131416auto131416Theobroma cacaoexon
exon-auto131417auto131417Theobroma cacaoexon
exon-auto131418auto131418Theobroma cacaoexon
exon-auto131419auto131419Theobroma cacaoexon
exon-auto131420auto131420Theobroma cacaoexon
exon-auto131421auto131421Theobroma cacaoexon
exon-auto131422auto131422Theobroma cacaoexon
exon-auto131423auto131423Theobroma cacaoexon
exon-auto131424auto131424Theobroma cacaoexon
exon-auto131425auto131425Theobroma cacaoexon
exon-auto131426auto131426Theobroma cacaoexon
exon-auto131427auto131427Theobroma cacaoexon
exon-auto131428auto131428Theobroma cacaoexon
exon-auto131429auto131429Theobroma cacaoexon
exon-auto131430auto131430Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto131431auto131431Theobroma cacaoCDS
CDS-auto131432auto131432Theobroma cacaoCDS
CDS-auto131433auto131433Theobroma cacaoCDS
CDS-auto131434auto131434Theobroma cacaoCDS
CDS-auto131435auto131435Theobroma cacaoCDS
CDS-auto131436auto131436Theobroma cacaoCDS
CDS-auto131437auto131437Theobroma cacaoCDS
CDS-auto131438auto131438Theobroma cacaoCDS
CDS-auto131439auto131439Theobroma cacaoCDS
CDS-auto131440auto131440Theobroma cacaoCDS
CDS-auto131441auto131441Theobroma cacaoCDS
CDS-auto131442auto131442Theobroma cacaoCDS
CDS-auto131443auto131443Theobroma cacaoCDS
CDS-auto131444auto131444Theobroma cacaoCDS
CDS-auto131445auto131445Theobroma cacaoCDS
CDS-auto131446auto131446Theobroma cacaoCDS
CDS-auto131447auto131447Theobroma cacaoCDS
CDS-auto131448auto131448Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t027160.1 ID=Tc02v2_t027160.1|Name=Tc02v2_t027160.1|organism=Theobroma cacao|type=mRNA|length=1170bp
ATGGGCTATATAGGGGCACATGGAGTAGCAGCTTTGCATAGATACAAATA
CAGTGGTGTGGATCACTCTTACCTTGCTAAATATGTATTGCAACCCTTTT
GGAGCCGCTTTGTCAACTTCTTTCCTCTTTGGATGCCACCAAACATGATA
ACACTTACAGGGTTTATGTTCTTGGTTACATCTGCACTGCTTGGCTATAT
TTATTCCCCTCACTTGGATTCACCCCCACCAAGATGGGTTCATTTTGCAC
ATGGGTTACTACTATTTTTATATCAGACTTTTGATGCTGTTGACGGGAAG
CAAGCTAGAAGGACAAACTCCTCTAGTCCACTTGGAGAGCTTTTTGACCA
TGGGTGTGATGCGCTTGCATGTGCGTTTGAAACCTTGGCTTTTGGGAGCA
CTGCCATGTGTGGAAGGGACAGTTTCTGGTTCTGGGTAATTTCAGCTGTT
CCATTTTATGGGGCTACATGGGAACACTATTTCACCAACACGCTTATCCT
TCCTGTAATTAATGGGCCTACTGAGGGTCTTGCACTGATATATACATGCC
ACTTTATGACAGCAATTGTTGGTGCCCAATGGTGGGCTCAGCAATTCGGG
AAGTCCATGCCCTTGTTCAGTTGGGTACCTTTTGTTAATGAAATTCCAAC
ATACAGAGCTGTGCTGTATGTGATGATAGCATTCGGTGTTATACCAACAG
TTGCTTTCAATATAAGCAATGTCCATAAGGTTGTTCAGGCAAGAAAAGGA
AGCATGTTACTGGCATTAGCCATGCTTTACCCCTTTGCTGTACTCATGGG
AGGAGTGCTGGTTTGGGATTATTTGTCTCCCTCTGATATTATGGGAAATT
ACCCACATTTAATTATACTGGGAACTGGACTTGCTTTTGGGTTCCTTGTG
GGACGGATGATTTTGGCTCACTTGTGTGATGAACCCAAGGGATTGAAAAC
TAACATGTGCATGTCACTCTTGTATCTTCCATTGGCAATTGCAAATGCTC
TTACAGCTAGACTGAATGATGGTGTTCCTTTAGTTGATGAGGTCTGGGTT
CTTCTTGGTTACTGTGTATTCACAGCATCACTCTACTTACACTTTGCCAC
ATCAGTTGTTCATGAAATTACGGCAGCTTTGGGTATTTATTGCTTCAGGA
TAACTAGGAAAGAGGCTTGA
back to top

protein sequence of Tc02v2_p027160.1

>Tc02v2_p027160.1 ID=Tc02v2_p027160.1|Name=Tc02v2_p027160.1|organism=Theobroma cacao|type=polypeptide|length=390bp
MGYIGAHGVAALHRYKYSGVDHSYLAKYVLQPFWSRFVNFFPLWMPPNMI
TLTGFMFLVTSALLGYIYSPHLDSPPPRWVHFAHGLLLFLYQTFDAVDGK
QARRTNSSSPLGELFDHGCDALACAFETLAFGSTAMCGRDSFWFWVISAV
PFYGATWEHYFTNTLILPVINGPTEGLALIYTCHFMTAIVGAQWWAQQFG
KSMPLFSWVPFVNEIPTYRAVLYVMIAFGVIPTVAFNISNVHKVVQARKG
SMLLALAMLYPFAVLMGGVLVWDYLSPSDIMGNYPHLIILGTGLAFGFLV
GRMILAHLCDEPKGLKTNMCMSLLYLPLAIANALTARLNDGVPLVDEVWV
LLGYCVFTASLYLHFATSVVHEITAALGIYCFRITRKEA*
back to top